Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1728 ATGGCGCATCAACCCATCGACCTCACGTTGGTAGTGATGCTACTCTTGTCTCTCTTCTCCATTGAAGCTTTAGCTGAGCCATCCTTGAAGCAACCTCAGCGTCCATATGATCCTCAAACCATCGCTTATATAAGAGGCTCTTGTCAAACCACTTTATACCCAGATCTCTGCCTTCGCAGCTTACATAGATTTGCAAATTCAAATATTCAAAGCCCACAACACTTGACTCATGTGGCCTTATCTGTGAGTCTCTCACGAGCACTACACACAAGAGATTACTTGCAGCAAGTGGCCAAACAATTCGAGGCACTCAAGAATAGTAACAAGCGTGGAGACTATTTTGTTGTGCAAGATTGCTTGAAGCAGATCGATGATAGTGTGGATGAGCTTGGCCATTCAATAAAAGAGCTTGAGAGGTTGAGTAAGATCCCAACCACTTTGATCAACGACGATGTGTTATGGCATATAAGCAACGTAGAGACGTGGATGAGCACTGCACTTACAGATGCGAGCACTTGTGTGGATTACTTTCCAGGTCACAGGATGAGTAAGATGAAGGCTTTAATTAGGGGTAAGGTCTTGAACGTTGCACAAGTCACTAGCAATGCTCTTGCCTTGTTTCATAGATATGCCGCTAAGTACCGAGGAGCAGCACAAGCCAAGAGACCCTAA 672 0.4479 MAHQPIDLTLVVMLLLSLFSIEALAEPSLKQPQRPYDPQTIAYIRGSCQTTLYPDLCLRSLHRFANSNIQSPQHLTHVALSVSLSRALHTRDYLQQVAKQFEALKNSNKRGDYFVVQDCLKQIDDSVDELGHSIKELERLSKIPTTLINDDVLWHISNVETWMSTALTDASTCVDYFPGHRMSKMKALIRGKVLNVAQVTSNALALFHRYAAKYRGAAQAKRP 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1728 223 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 210 IPR035513 -
Alju02g1728 223 NCBIfam pectinesterase inhibitor domain 11 210 IPR006501 GO:0004857
Alju02g1728 223 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 209 IPR035513 -
Alju02g1728 223 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 206 - -
Alju02g1728 223 Pfam Plant invertase/pectin methylesterase inhibitor 43 206 IPR006501 GO:0004857
Alju02g1728 223 FunFam Pectinesterase inhibitor 3 39 211 - -
Alju02g1728 223 Coils Coil 120 140 - -
Alju02g1728 223 CDD PMEI-like_3 47 212 - -
Alju02g1728 223 SMART PMEI_2 39 206 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1728 Alju-ChrAlju02 16356732 16357403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1728 25 207 Carbohydrate Esterase AT3G14310 27.027 2.51e-15 72.4