Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1727 ATGGCACAACTCATCAACCTCACATTGCTAGTGATGCTCCTCTTGTCTCTCTTCTCCATTGAAGCTTTAGCTAAGCCATCCTTGAAAAGACCTCATAGTCGATATGATCCTCAAACCGTCGCTTATATAAAAGCCTCTTGTAAGACCACTTTATACCCAGATCTATGCCTCCGCTACTTATATAAATTTGCCAATTCAAATATTCAAAGCCCGGTACACTTGACTCATGTGGCGTTATCTGTGAGTCTCTCACGGACACTACACATAAGAGATTACTTGGCGCAAATGGCCAAACAATTCGAGACACTCAAGAATAGTAACAAGCGTAGAGACTATTTTACTCTAGAAGATTGCTTGACCCAAATCAATGATGGTGTGGACGAGCTTGGGTATTCTATAAGAGAGCTTGAGAGGTTGAATAAGATCCCAACCACTTCGATCAACGACGATGTGTTATGGCACATAAGCAACGTAGAGACGTGGATGAGCACTGCGCTTACAGATGCGAGCACTTGTGCGGATTCCTTTGGAAGACATAGGATGAGTAAGATGAAGGAAGCCATAAGGGGTCAGGTCTTGAACGTTGCACAAGTCACAAGCAATGCACTTGCCCTATTTCATAGATATTCAACTATGTACCAAGCAGCAGCACAAGCCAAGAGACCCTGA 669 0.435 MAQLINLTLLVMLLLSLFSIEALAKPSLKRPHSRYDPQTVAYIKASCKTTLYPDLCLRYLYKFANSNIQSPVHLTHVALSVSLSRTLHIRDYLAQMAKQFETLKNSNKRRDYFTLEDCLTQINDGVDELGYSIRELERLNKIPTTSINDDVLWHISNVETWMSTALTDASTCADSFGRHRMSKMKEAIRGQVLNVAQVTSNALALFHRYSTMYQAAAQAKRP 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1727 222 PANTHER PECTINESTERASE INHIBITOR-LIKE 9 205 - -
Alju02g1727 222 NCBIfam pectinesterase inhibitor domain 9 209 IPR006501 GO:0004857
Alju02g1727 222 CDD PMEI-like_3 45 211 - -
Alju02g1727 222 SMART PMEI_2 38 205 IPR006501 GO:0004857
Alju02g1727 222 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 209 IPR035513 -
Alju02g1727 222 FunFam Pectinesterase inhibitor 3 38 210 - -
Alju02g1727 222 Pfam Plant invertase/pectin methylesterase inhibitor 42 205 IPR006501 GO:0004857
Alju02g1727 222 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 209 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1727 Alju-ChrAlju02 16338723 16339391 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1727 37 206 Carbohydrate Esterase AT3G14310 26.163 2.37e-11 60.8