Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1726 ATGCAGCAAGTGGCCAAACAATTTGAGGCACTCAAGAATAGTAACAATCCTAGAGACTATTTTGTTCTACAAGATTGCTTGAAGCAGATCGATGATAGTGTGGATGAGCTTGGCCATTCAATAAAAGAGCTTGAGAGGTTGAATAAGATCCCAAGCACTTCGATCAACGACGACGTGTTATGGCACATAAGCAACGTAGAGACGTGGGTAAGCACTGCGCTTACAGATGCAAGCACATGTGTGGATTATTTTCCAGGTCATATGATGAGTAAGATGAAGGCAGCCATAAGGGGTCAGGTCTTGAATGTTGAACAAGTCACAAGCAATGCTCTTTCCTTGTTTCACAGATATGCAACTTTGTACCGAGCGGCAGCCGCAGCAAAGAAACCCTAA 393 0.4377 MQQVAKQFEALKNSNNPRDYFVLQDCLKQIDDSVDELGHSIKELERLNKIPSTSINDDVLWHISNVETWVSTALTDASTCVDYFPGHMMSKMKAAIRGQVLNVEQVTSNALSLFHRYATLYRAAAAAKKP 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1726 130 Coils Coil 27 47 - -
Alju02g1726 130 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 113 - -
Alju02g1726 130 Pfam Plant invertase/pectin methylesterase inhibitor 5 113 IPR006501 GO:0004857
Alju02g1726 130 CDD PMEI-like_3 10 119 - -
Alju02g1726 130 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 117 IPR035513 -
Alju02g1726 130 NCBIfam pectinesterase inhibitor domain 2 117 IPR006501 GO:0004857
Alju02g1726 130 SMART PMEI_2 1 113 IPR006501 GO:0004857
Alju02g1726 130 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 9 116 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1726 Alju-ChrAlju02 16334433 16334825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1726 6 113 Carbohydrate Esterase AT1G53830 32.727 1.20e-10 55.8