Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1679 ATGGGTTCTTCAAATGGTGGCGTGCCGCCAGGTTTCCGGTTTCATCCAACCGACGAAGAGCTTCTTCATTATTACTTGAAGAAGAAGGTGAACTTTCAAAAGTTTGACATGGAGGTTATTAGGGAAGTCGACTTGAACAAGATTGAGCCTTGGGATTTGCAAGAGAGGTGTAGAATAGGGTCAACACCACAGAACGAGTGGTACTTCTTCAGCCACAAGGACAGGAAGTATCCAACGGGGTCGAGGACGAACCGGGCGACAAACGCCGGCTTCTGGAAGGCGACGGGGCGAGACAAGTGCATCAGGAACAGCTTCAAGAAGATTGGGATGAGGAAGACTCTGGTCTTCTACAGAGGCAGAGCTCCTCATGGCCATAAGACTGACTGGATCATGCATGAATATCGCCTTGAAGATTCTGACGATGCTCAACCTAACCCCAATGAAGATGGGTGGGTGGTGTGCAGAGTGTTCAAGAAGAAGAACCTATTCAAGATTGGAAATGAAGGAAGCTCCATGCACAACACAGACCAACAACTCAACACTTCCTCAAGCATCAACCAACCTCGCTCCTTCATGCACAGTAGACAAAGCCAATACTTACTTCATCTTCAACAAAACCCTAGAAACTCATCTTCTTCTGGCTTCCAACTTGAAAAACCCGAGCTTGCTCTTCACTATCCTCCTCCTCACTTGCAAAACCCTCAATACTCTCTCTTTCAGGCCCAACCCCTCCTTCCTCCTGCAACTCACTACACTTCATATTCCTCAGCCCTACCGTCAGACACACCTTCCTTGGCTGCCAAGCAACTCATGACAAACCCAGCGGCCGGTGACTGTGATAGTGGCGGTGGTGGCAGTGAGGGCTTGAGGTACCAGGTTTCGGAGACGGTGAACATGGAGGTTGGCACGTGTGAACCGACGACAGGTCATCAAGAGATTGGAACAACAAGAGAAGATCAAGGCTTTAATGAATGGGGTGTGCTTGATAGACTTGTGGTAACTTCTTCTTCTCATCATCATCATATTGGAAATGAAGAATCTTCCAAAGGGGTCAGGTTTGAGGATGCAAATAATCCACAATCTGTTCATCAGATCAATCATCAGCAGCAGCTTTCATTGCGTGGAGAAGTTGACTTTTGGGGTTATGGAAAGCAATAA 1158 0.4758 MGSSNGGVPPGFRFHPTDEELLHYYLKKKVNFQKFDMEVIREVDLNKIEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSFKKIGMRKTLVFYRGRAPHGHKTDWIMHEYRLEDSDDAQPNPNEDGWVVCRVFKKKNLFKIGNEGSSMHNTDQQLNTSSSINQPRSFMHSRQSQYLLHLQQNPRNSSSSGFQLEKPELALHYPPPHLQNPQYSLFQAQPLLPPATHYTSYSSALPSDTPSLAAKQLMTNPAAGDCDSGGGGSEGLRYQVSETVNMEVGTCEPTTGHQEIGTTREDQGFNEWGVLDRLVVTSSSHHHHIGNEESSKGVRFEDANNPQSVHQINHQQQLSLRGEVDFWGYGKQ 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1679 385 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Alju02g1679 385 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Alju02g1679 385 ProSiteProfiles NAC domain profile. 8 159 IPR003441 GO:0003677|GO:0006355
Alju02g1679 385 FunFam NAC domain-containing protein 17 163 - -
Alju02g1679 385 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Alju02g1679 385 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1679 Alju-ChrAlju02 15557096 15561180 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1679 1 381 NAC Transcription Factor Family AT1G33280 52.356 7.51e-120 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g1679 NAM 9.2e-37 No_clan