Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1661 ATGTCTCAGCTCAAAGAGCATCAGAAGGCTCTTGAAGATGACATTAATATGATTGATTCTTCATATTTTGATGAAATTCTTGAACTTTTAAAGAGTGACACAGAGGATATATATAATGATGGTTCATCAAGCCAATTAGCCAGCAGTATGAAGAAGAAGAACAATGAACAAGAAACTGCTCCTAATAAGAAATCAGAAGCAAGTAGATCTGTTCCTAGGCAACAAAGAAAACCAACTCCTTGGACCAAGACTGAACATGAAATGTTCTTATTGGGACTTGAACGCTTTGGAAGAGGAGATTGGAGAAGCATTTCGAGGCATTTGGTGCCATCTAGAACTCCAGCTCAAGTCGCAAGTCATGCACAAAAGTACTTTCAGAAACTCAAAAACCCGAAGTCTCGCCCGAGAAAAGACAGATCATTCATGCGAACGGTGGACGATTCGCAAAAGCCGGTGGTGGAAAATGCGCAACTTGCCTTCTCCGGTGACAAGAAGGCTCCATGA 504 0.4147 MSQLKEHQKALEDDINMIDSSYFDEILELLKSDTEDIYNDGSSSQLASSMKKKNNEQETAPNKKSEASRSVPRQQRKPTPWTKTEHEMFLLGLERFGRGDWRSISRHLVPSRTPAQVASHAQKYFQKLKNPKSRPRKDRSFMRTVDDSQKPVVENAQLAFSGDKKAP 167
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1661 167 CDD SANT 80 125 IPR001005 -
Alju02g1661 167 Gene3D - 79 130 - -
Alju02g1661 167 SMART sant 77 127 IPR001005 -
Alju02g1661 167 Pfam Myb-like DNA-binding domain 80 125 IPR001005 -
Alju02g1661 167 ProSiteProfiles Myb-like domain profile. 73 125 IPR001005 -
Alju02g1661 167 MobiDBLite consensus disorder prediction 38 55 - -
Alju02g1661 167 MobiDBLite consensus disorder prediction 111 167 - -
Alju02g1661 167 NCBIfam myb-like DNA-binding domain, SHAQKYF class 79 127 IPR006447 GO:0003677
Alju02g1661 167 SUPERFAMILY Homeodomain-like 75 130 IPR009057 -
Alju02g1661 167 PANTHER TRANSCRIPTION FACTOR KUA1 2 148 - -
Alju02g1661 167 FunFam transcription factor MYB1R1 79 130 - -
Alju02g1661 167 MobiDBLite consensus disorder prediction 38 85 - -
Alju02g1661 167 MobiDBLite consensus disorder prediction 64 78 - -
Alju02g1661 167 ProSiteProfiles SANT domain profile. 81 129 IPR017884 -
Alju02g1661 167 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 129 IPR017930 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju02g1661 Alju-ChrAlju02 15075322 15079518 Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju02g1661 Myb_DNA-binding 8.3e-11 CL0123