Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1651 ATGTCTCAAGACAGTTCAGACCCTTCTTCGGCTTGCTGCTCAAGATCGGAGCATTTGGATTCAGCTTCAGCTGAGCTCAAGCTTTACCGAGCCTTCATTTTCTCTGTACCCATCTTCTTCACTTTCATCCTGCTTTTTCTGTTCTACGTTTTCTACCTTCGACCTCGTAGGGTTGACTGGTCGTCTCTTAGGATGAGAGCGTTTGCGGCTGCGGAGGATAATGGCGGTAACTCCAGGCCTGAATTGGGTTTGAAGAAAGAATTGAGAGAGATGCTGCCGATTATCGTATACAAAGAAAGCTTCTCAGTTAAAGATACACAATGCTCAGTTTGCCTTTTGGACTACCAGCCAGAAGACAAGCTTCAACAGATACCTGCATGCGGCCATACATTTCACATGAGCTGCATCGATCTTTGGCTCACCAACCACAGCACCTGCCCTCTCTGCCGCTTGTCCCTTCTAGCTTCTGCCAAATCTTCAATTGAGACATCTAACTTACAGAGACCATCTGGTGATGAAGATACACCAACTACTCAATTCTCTGAATCAAGATCCACAACACATCCAGATAATAGTGTTGCCCAGAGTTGCTCTAGAGATAATGCAAGCAGTGCCCCGTGCATTGATGTTGAAAGAGGAAATGCCGAAAGCAGTTAG 657 0.4612 MSQDSSDPSSACCSRSEHLDSASAELKLYRAFIFSVPIFFTFILLFLFYVFYLRPRRVDWSSLRMRAFAAAEDNGGNSRPELGLKKELREMLPIIVYKESFSVKDTQCSVCLLDYQPEDKLQQIPACGHTFHMSCIDLWLTNHSTCPLCRLSLLASAKSSIETSNLQRPSGDEDTPTTQFSESRSTTHPDNSVAQSCSRDNASSAPCIDVERGNAESS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1651 218 MobiDBLite consensus disorder prediction 162 203 - -
Alju02g1651 218 FunFam RING-H2 finger protein ATL7 74 155 - -
Alju02g1651 218 Pfam Ring finger domain 107 150 IPR001841 -
Alju02g1651 218 PANTHER OS11G0150450 PROTEIN 40 195 - -
Alju02g1651 218 SMART ring_2 108 149 IPR001841 -
Alju02g1651 218 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Alju02g1651 218 CDD RING-H2_EL5-like 107 150 - -
Alju02g1651 218 SUPERFAMILY RING/U-box 92 154 - -
Alju02g1651 218 MobiDBLite consensus disorder prediction 162 218 - -
Alju02g1651 218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 155 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1651 Alju-ChrAlju02 14920230 14922708 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1651 21 217 C3H Transcription Factor Family AT4G10150 52.941 4.96e-66 202