Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1596 ATGTCGAGCAATTCGCTGCCGCCATCGCATCTCTCTGACATATCGCCCGCGAAACCTACCGGCAATAATGGTTCCCCTTCGAAGGCATCATCGCCGGCATCATCTCGAGCCAAGCTCCAGAAAAGTCCTCCGGTTCCTAATTGGTGGACTCCGGTAGAGGAAGAAGGCGAGCAAAGGAATATTGAAGAGGCGATGAGTGAAATAGAACCGCAGCAAATCGAAGATGCTGCTTCTTCGATTTTGCTTGCATCGTCTTTAGGGCTCAATCAAATTAGGACTCGCTCCGATTCATCGCGTCTTAGGTTTCCGTCCTTGGCTAATGCACCTTCCAGTCCGAGGAAGGATTCCGTCGGAACTGATGATCGGACAAATGGAAAGATAATACATGGGACTCATGGTAAATTGTCAAGAGCTCCTTCCCATGCTGTTCCTCTCATGCAGGGTAACGATGACACATTTGCCAAAGAATTGCAGTCGCCGCGTGTTCAAGCAATACTTCGTGTCACAAGTGGACGCAAGAAGAAAATTGATTTCAAAAGCTACTCTCATGAGCTCAACTCAAAAGGAGTCAAAGCTTTCCCAGTTTGGAAAAGTCGTGCTATATTGGGGCATATCGAGGAGATAACGGTGGCAATCAGAACTAGGTTTGGAAAGCTAAAGGAAGAAGTTGATTCTGACTTAAGTGCATTTGCCGGAGATTTGGTGGAACTCCTGGAAAAGTTTTCAAAATCTCATCCTGAATGGATAGAAAGCTTGGAGGATCTGTTAATTATTGCCCAACGATGTGCAAAGATGTCGCCGAGCGAGTTTTGGATGAACTGCGAAGCCATTGTTCAGAATTTAGATGACAGGCGTCAAGAGTTACCAATGGGGATTCTCAAGCAAGCTCATACACGCCTACTGTTTATCCTCAGTCGATGCACACGTCTCGTTCAGTTCAACAAAGAGAATGTCTATGATCAAGAACACATTCTGGGTCTTCACCAACTCAGCGATCTTGGTATTTATAGAGAGCACATTTTGAATGCCGTAGAACATAACAAATTCATTGGTGATGAGGAGCAGCCAATAACAAAATCTCATGGTAAAGAACCTGACAATGATCAGACAATAATAAATCAAATCCAAATTGATCATCAACACGTGAGCACTACCGCAACTGACACGTCCAGAAGTGGTGATTCAACTGGAAGCGGCTATAAGATTTCATCTTGGAAAAAGTTTCCAAGTCATGCTGAGAAGAGGTGCAAACATAATAAAGGTCACGAAGAACAGGATCAGGTTCATGAGGTCAAAGAAGAAAACGTAGAAAACGTGGATACTGATTCATCCAATCCTGACCTATCCTCCAGAGGCCATAAGCTACATTGGGGATTCTGGGGAGATCACCACAATCTAACATATGAGAACTCAATGATATGCAGAATCTGTGAGGTTGAGATACCAATTGTATATGTGGAGGAGCACTCTCAAATATGTACCATTGCTGATAGATGTGATTTAAAAGGCCTAACTGTGAATGAAAGACTTGAAAGATTTGCTGAAACTATTGAAAAGATAATAGAGTCATGGACACCTAGAAGCACACCTAGAAGCACCCCAAAAAGCACTGATGGTCCTGCTGGAGAAATTAGCTTTGAGAATGCCAGAGTATCTACGTCAAGTTTGCACGATGAGTTCAATGATTTGTCTCTAATTGAGAGAAACAGCTTATCTCGTAGGGGCTCAGAAGACATGCTTGATTCTGTTCCTGAAGATGACAATAATGCTTTTGTTAGGGATCATCATGATCTGAGCCTTTTGCCTAAAATGCCATGCGAAACATATTTCAAACATGATCAATGCTCAAAGATGTCTTCGGTTGGAAGCTTGACACCCAGATCACCATTATTAACCCCACGAACAAGTCAGGTAGAAATGTTATTAAATGCGCGAAGAACAGTATTGGAACTTGAGAGTTATTTCCAGATTAACAAACTAGTGGAAATTGCTCGTTCTGTCGCACAAGTGAATGACTACAACTACGTAAGTCGTCGCATAGAAGAACTTAATCTCACTATTCAGGCCAGAAAGGTCGATGCTCTCATTGTCGAAACTTTTGGTCGACGCATAGAGACCCTCTTGGCGGAAAAGTATCTAACTCTCTGTCATCAAATAGACAACGAGAAGGTAGACTCATCGAATGGCTTGGTTGAAGAAGAGAGTTCAGTGGAAGATGATACTGTTCGAAGCCTTCGTGCTAGCCCTATTCATCATTCTTCTAGGGATCGAACCTCCATTGAAGACTTCGAAATAATAAAACCAATTAGCCGAGGAGCATTCGGAAGAGTTTTCCTTGCCCGAAAAAGAGCAACAGGAGATTTATTTGCCATAAAGGTTCTCAAAAAGGCTGATATGATCCGTAAAAATGCAGTTGAAAGTATTTTGGCTGAGCGAGATATTCTTATATCAGTTCGAAATCCCTTTGTGGTTCGATTTTTCTACTCTTTCACTTGTAGGGAAAACCTTTATTTGGTTATGGAATTCTTAAATGGTGGAGACCTTTATTCTCTATTGAGAAATCTAGGTTGTTTAGATGAAGATATGGCACGTGTGTATATAGCAGAAGTTGTGCTTGCATTGGAGTATTTGCATTCATTGCATGTAATTCATCGAGACTTGAAGCCTGATAACTTGTTAATTGGTCAAGATGGTCACATCAAGTTGACAGATTTTGGGCTCTCCAAGGTTGGCCTTATTAACAGCACGGATGACTTGTCAACTTCACCATTTTCTACTGATGATCTTGAAGGAAATGATGAATCAAAAAAAGATCATTCTTCAAAAGTGGAACAACGTCAAAAGCAGTTAGTTGTTGGCACCCCAGATTATTTGGCACCTGAAATACTTCTCGGCATGGGACATGGTGCGACTGCAGATTGGTGGTCTGTTGGTATTATACTTTATGAGCTCCTTGTGGGTATTCCACCATTTAATGCAGCACATCCCCAGGTAGGTGTTTCTGATATAAAAACCCGTAATATTCGGACAAATTCAAAGAAAAATATGAGAGATGATAGCATTCTTTTTATTTTATTTAGCACTAAACAACCAAATAATGGTAGTAGATATGTTGGGATAGAAGATAACCTAGGCTTCACATCAAGGGATCTTGGGCATTTTGCCGAAATACAAACTGAGATGCTGGACGCACAAGATAGCTTAAAACTAATTCTCATGGATTCTGTGCTGCAGGAAATTTTTGACAAAATAATTAATAGAGACATACAGTGGCCAAATATACCTGAGGAGATGAGCTATGAAGCATATGATTTGATTGACAAATTACTTGCGGAGAATCCAGTCCAACGATTGGGAGCAACAGGAGCTGGTGAGGTTAAAAGTCACCCCTTTTTCAAGGATATTAATTGGGATACCCTAGCAAGACAGAAGGCTGCGTTCATACCATCAGCTGAAAATCATAACACAAGTTATTTCATGAGCCGCTACATATGGAACCCAGATGATGAACATCTTACTGGAGGTAGTGATTTTGACGACCTGACTGATTCTTGCTTCAGTGGTTCAGGCAGCGACTTTATAGATGAAGATGGGGATGAATGTGGTAGCTTAGCAGATTTTAGTGGACCACCTCCTGAGGTGCAGTACTCATTTAGTAATTTCTCTTTTAAGAACTTGTCTCAGTTAGCATCTATCAACTATGATTTGGTGATCAAGAATGCCAAAGAATCATCCGATGACTCCAAGCCATCCGCATCCTCGCGGGACCTCGGCTCCGACGAAGATGATAGTGGCGGCAAGAGAACCCCACGTGACCAATTGACCATGCCACCACCATCGCCTACAGCCAACGAAAGCTCCATTTGCTCCCTTCCAGCCGCTCTAGCTTTACACTGCACGGTACCTGCTCAACGCAATGTCTCCAGCAATAATCAAACTGCAGTATAG 3948 0.4217 MSSNSLPPSHLSDISPAKPTGNNGSPSKASSPASSRAKLQKSPPVPNWWTPVEEEGEQRNIEEAMSEIEPQQIEDAASSILLASSLGLNQIRTRSDSSRLRFPSLANAPSSPRKDSVGTDDRTNGKIIHGTHGKLSRAPSHAVPLMQGNDDTFAKELQSPRVQAILRVTSGRKKKIDFKSYSHELNSKGVKAFPVWKSRAILGHIEEITVAIRTRFGKLKEEVDSDLSAFAGDLVELLEKFSKSHPEWIESLEDLLIIAQRCAKMSPSEFWMNCEAIVQNLDDRRQELPMGILKQAHTRLLFILSRCTRLVQFNKENVYDQEHILGLHQLSDLGIYREHILNAVEHNKFIGDEEQPITKSHGKEPDNDQTIINQIQIDHQHVSTTATDTSRSGDSTGSGYKISSWKKFPSHAEKRCKHNKGHEEQDQVHEVKEENVENVDTDSSNPDLSSRGHKLHWGFWGDHHNLTYENSMICRICEVEIPIVYVEEHSQICTIADRCDLKGLTVNERLERFAETIEKIIESWTPRSTPRSTPKSTDGPAGEISFENARVSTSSLHDEFNDLSLIERNSLSRRGSEDMLDSVPEDDNNAFVRDHHDLSLLPKMPCETYFKHDQCSKMSSVGSLTPRSPLLTPRTSQVEMLLNARRTVLELESYFQINKLVEIARSVAQVNDYNYVSRRIEELNLTIQARKVDALIVETFGRRIETLLAEKYLTLCHQIDNEKVDSSNGLVEEESSVEDDTVRSLRASPIHHSSRDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEFLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHSLHVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSTSPFSTDDLEGNDESKKDHSSKVEQRQKQLVVGTPDYLAPEILLGMGHGATADWWSVGIILYELLVGIPPFNAAHPQVGVSDIKTRNIRTNSKKNMRDDSILFILFSTKQPNNGSRYVGIEDNLGFTSRDLGHFAEIQTEMLDAQDSLKLILMDSVLQEIFDKIINRDIQWPNIPEEMSYEAYDLIDKLLAENPVQRLGATGAGEVKSHPFFKDINWDTLARQKAAFIPSAENHNTSYFMSRYIWNPDDEHLTGGSDFDDLTDSCFSGSGSDFIDEDGDECGSLADFSGPPPEVQYSFSNFSFKNLSQLASINYDLVIKNAKESSDDSKPSASSRDLGSDEDDSGGKRTPRDQLTMPPPSPTANESSICSLPAALALHCTVPAQRNVSSNNQTAV 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1596 1315 SMART serkin_6 763 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1596 1315 FunFam Microtubule associated serine/threonine kinase 2 847 1047 - -
Alju02g1596 1315 MobiDBLite consensus disorder prediction 524 543 - -
Alju02g1596 1315 MobiDBLite consensus disorder prediction 923 947 - -
Alju02g1596 1315 Pfam Protein kinase domain 763 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1596 1315 MobiDBLite consensus disorder prediction 1 41 - -
Alju02g1596 1315 MobiDBLite consensus disorder prediction 1242 1287 - -
Alju02g1596 1315 MobiDBLite consensus disorder prediction 416 439 - -
Alju02g1596 1315 FunFam probable serine/threonine protein kinase IREH1 761 850 - -
Alju02g1596 1315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 882 894 IPR008271 GO:0004672|GO:0006468
Alju02g1596 1315 MobiDBLite consensus disorder prediction 1242 1269 - -
Alju02g1596 1315 MobiDBLite consensus disorder prediction 100 123 - -
Alju02g1596 1315 MobiDBLite consensus disorder prediction 929 945 - -
Alju02g1596 1315 SUPERFAMILY Protein kinase-like (PK-like) 760 1162 IPR011009 -
Alju02g1596 1315 CDD STKc_MAST_like 769 1137 - -
Alju02g1596 1315 ProSiteProfiles Protein kinase domain profile. 763 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1596 1315 Gene3D Transferase(Phosphotransferase) domain 1 847 1013 - -
Alju02g1596 1315 ProSiteProfiles AGC-kinase C-terminal domain profile. 1133 1233 IPR000961 GO:0004674|GO:0005524|GO:0006468
Alju02g1596 1315 MobiDBLite consensus disorder prediction 381 448 - -
Alju02g1596 1315 Gene3D Phosphorylase Kinase; domain 1 761 846 - -
Alju02g1596 1315 MobiDBLite consensus disorder prediction 381 403 - -
Alju02g1596 1315 Gene3D Transferase(Phosphotransferase) domain 1 1078 1150 - -
Alju02g1596 1315 PANTHER SERINE/THREONINE-PROTEIN KINASE 431 1191 - -
Alju02g1596 1315 MobiDBLite consensus disorder prediction 524 539 - -
Alju02g1596 1315 MobiDBLite consensus disorder prediction 1 60 - -
Alju02g1596 1315 MobiDBLite consensus disorder prediction 100 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1596 Alju-ChrAlju02 14313213 14336337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1596 1078 1252 AGC Kinase Gene Family AT5G62310 76.136 2.90e-77 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Alju02g1596 Pkinase 1.7e-60 CL0016