Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1591 ATGGCTTCATCAATTCCTAGTTCTCATCACAACACTTTCTTCTCAATCCTTCTTTCCTTTTCATTGATCTTCTCAATCTCCCACACGGCGATTGCTGCTTCATCTTATTCTCCTCCTCCTCCTCCTTCTTCTTCCAACTCCACCAATACCCTAAAAACCTACAAAGCTTTCATAAAGCAGTATTGTAGTTCCACCACATACCCTAAAAATTGCTACAAGTATCTCTCTCCTTATGCTTCTGTGATCAAAACAAGCCCTCTTGTTCTCACCAAGTCCTCCATTTATGTTTCTCTCAAACAAACCATCAAGTCATATTCTGCACTCAAATCGTTGACCAAAGTCAAGGGTCTTACTCACAATGAAACCCAAGTCATCAAGGATTGTTACGAGAACATTGGTGATTCACTTGATGAGGTTAAGGATTCGGCTGCCGCCGTCAAGAACTTGACGGGCGGTAACACCTACGATGAGGCGTTTGAGTGGAGTAACATAAAGACGTGGATGAGCGCCGCCATTACAAGTTATTACACGTGCACCGACGAGTTTGATGAGTTGACGATAAGAGCTTCGTTGCAAAAGAAGATCACAAAAGATGTCTTGAAAGCTGAAAACATGGTTAGCAATGCTCTCTCATGCGTCAACAAATTCACCTCTTACTAA 660 0.4227 MASSIPSSHHNTFFSILLSFSLIFSISHTAIAASSYSPPPPPSSSNSTNTLKTYKAFIKQYCSSTTYPKNCYKYLSPYASVIKTSPLVLTKSSIYVSLKQTIKSYSALKSLTKVKGLTHNETQVIKDCYENIGDSLDEVKDSAAAVKNLTGGNTYDEAFEWSNIKTWMSAAITSYYTCTDEFDELTIRASLQKKITKDVLKAENMVSNALSCVNKFTSY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1591 219 NCBIfam pectinesterase inhibitor domain 44 215 IPR006501 GO:0004857
Alju02g1591 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 17 211 - -
Alju02g1591 219 SMART PMEI_2 53 212 IPR006501 GO:0004857
Alju02g1591 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 216 IPR035513 -
Alju02g1591 219 Pfam Plant invertase/pectin methylesterase inhibitor 57 211 IPR006501 GO:0004857
Alju02g1591 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 218 IPR035513 -
Alju02g1591 219 CDD PMEI-like_3 62 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1591 Alju-ChrAlju02 14272523 14273182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1591 53 217 Carbohydrate Esterase AT1G53830 31.765 5.43e-15 71.2