Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1585 ATGGATCATCGTCGTCGATCTCTGTTAATATTATTCTCAAGTCTGTTTCTCTTAGCTTGTCTTCTTCCAACAGCTACATCAAGATCAAGAAGAAGACCAAAACAACCATTGTCTCAGAACATTCAATGGTGGTGCGATCGAACCCCACACCCAGAACCATGCAAATTCTATATGATGAGCCAAAACCACCATGGCCACACGCTGAAACACAAGTCCAACTTCAGAGTCAACCTAGTTCAGTTAGCTTTGAATCAAGCTCAACATATGAAATTTGAAGCTCATGACTATACCCAAAATGGTGAAGCAGAGAAGCTTAAAGCTGTGTTTGGTGATTGCTTGAAGCTCTACGATAACACCATCTTCCATCTGAACCGAACCCTCGTAGGGCTCGGATCGAAACATGGCGACCGTGGTGATCATCATCGTTGTTCCAGTTTGGACGCTCAGACATGGCTGAGTACAGCTCTAACTAACATTCAGACATGTAAGAACGGAGCTAAGGACTTGAAGCTTAGTGTGCCACAATTCACAGAGGCCAAAACTTTGTGTTACAATGTCACCAAGATGATAAGCAATAGCTTGGCGATAAACGCAGCGTTTTTTACGAGGCCTGAGAGAGAAGAACTCATGATGAGTGGGAATAATAATAATGTTGTTGATGAGGAGCATGGATATCCGAGGTGGTTTTCGAGTCAGGAGAGGAAGCTGGTGACGGTGTCGGCGTCGAAGTTAAAGGCGAATCTGGTGGTGGCGAAGGACGGGTCGGGGCATTTCAAGACGGTGCAGGCGGCGATAGATGCGGCGGCGAAGAGGAAGTACAAGACGAGGTTTGTGATAAGAGTGAAGAAAGGGGTTTATAATGAGAACATAGAGGTTGACAAGAGTAACGGCAACATAATGCTGATTGGTGATGGTTTGAGATATACTGTGATTACAAGTTCCAAGAGTACTTCAGATGGCATTACCACCTATAGCACTGCCACTGCTGGCATAGATGGGCCTAACTTCCTTGCTCGTGATATATCATTTGTAAACAGTGCTGGTCCTCGTAAGGGACAAGCAGTGGCACTCCGATCATCCTCCGATCTCTCCGTCTTCTATCGATGTGGCATTGTAGGTTATCAAGACACTGTCATGGCCCATGCACAACGTCAATTCTACAAACAGTGTTACATTTTAGGTACTGTAGATATCATCTTCGGCAATGCTGCCGTAGTTTTTCAAAATTGTGTAATCCTTGTAAGGAGGCCGTTATCGGGCCAGGCCAATATGATCACAGCCCAAGGTCGAGGCGACCCGTTTCAAAATACAGGCACCACATTACAAAATTGCATAATCAAAGCCTCGACGGACCTTAAGCCCATCGTCAGCTCCATCACGACCTACTTGGGCCGGCCCTGGCAAGAATACTCTAGGGTTGTGGTAATGAAGTCCTACATAGATTCCTTCGTAAGCCCATTGGGCTGGTCTAAATGGGGAAATAGTGATTTTGCTTTAAGTACTCTGTATTTTGGGGAATATAAGAACTTCGGCCCTGGTTCATCCACAAAAAATAGGGTAAAATGGAAAGGATATCATGTGATAACTAGGGCAACTGAAGCATCTAGCTTCACTGTGAATGGTCTCATTGCTGGCAGCAGCTGGTTGCCTTCAACTGGAGTTCCATTTACTTCTGGTTTATAG 1683 0.4522 MDHRRRSLLILFSSLFLLACLLPTATSRSRRRPKQPLSQNIQWWCDRTPHPEPCKFYMMSQNHHGHTLKHKSNFRVNLVQLALNQAQHMKFEAHDYTQNGEAEKLKAVFGDCLKLYDNTIFHLNRTLVGLGSKHGDRGDHHRCSSLDAQTWLSTALTNIQTCKNGAKDLKLSVPQFTEAKTLCYNVTKMISNSLAINAAFFTRPEREELMMSGNNNNVVDEEHGYPRWFSSQERKLVTVSASKLKANLVVAKDGSGHFKTVQAAIDAAAKRKYKTRFVIRVKKGVYNENIEVDKSNGNIMLIGDGLRYTVITSSKSTSDGITTYSTATAGIDGPNFLARDISFVNSAGPRKGQAVALRSSSDLSVFYRCGIVGYQDTVMAHAQRQFYKQCYILGTVDIIFGNAAVVFQNCVILVRRPLSGQANMITAQGRGDPFQNTGTTLQNCIIKASTDLKPIVSSITTYLGRPWQEYSRVVVMKSYIDSFVSPLGWSKWGNSDFALSTLYFGEYKNFGPGSSTKNRVKWKGYHVITRATEASSFTVNGLIAGSSWLPSTGVPFTSGL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1585 560 Gene3D - 240 560 IPR012334 -
Alju02g1585 560 CDD PMEI-like_3 43 200 - -
Alju02g1585 560 SUPERFAMILY Pectin lyase-like 244 559 IPR011050 -
Alju02g1585 560 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 200 IPR035513 -
Alju02g1585 560 SMART PMEI_2 36 196 IPR006501 GO:0004857
Alju02g1585 560 Pfam Plant invertase/pectin methylesterase inhibitor 40 196 IPR006501 GO:0004857
Alju02g1585 560 PANTHER PECTINESTERASE 17 550 - -
Alju02g1585 560 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Alju02g1585 560 Pfam Pectinesterase 247 545 IPR000070 GO:0030599|GO:0042545
Alju02g1585 560 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 200 IPR035513 -
Alju02g1585 560 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Alju02g1585 560 FunFam Pectinesterase 241 560 - -
Alju02g1585 560 NCBIfam pectinesterase inhibitor domain 10 197 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1585 Alju-ChrAlju02 14175912 14178472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1585 38 560 Carbohydrate Esterase AT5G51500 54.943 0.0 585