Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1584 ATGATCCAACTTTCTCTTTTTGGGTCTTCTGGTTTCTCTTTAAGATTAGTGATTGGTCTCTATCAGTTGCGGGTAGAGGTGGCACTAAACAATCCCATTTTTCCTTTCTTCAATTTCTCATCTTTCCCAAAACGCTTTCCCACCAATTCAGCTCCTTCTGACAGATTTTCTCAAAGTTCATCATATCGCCGAGAGATTGATTTGAAAGATTTGAAGAAGGAAAAATTCAGGATTCGAAAAAAGAAAAGGGAGAATATGAATTCTTTTTCATATGTTCCACCTGGATTTAGGTTCCATCCCACAGATGAGGAACTTGTTGATTACTACCTGAGGAAGAAAGTCACTTCAAGAAGGATTGACCTTAATGTCATCAAAGATGTGGACCTCTACAAAATTGAGCCATGGGATCTTCAAGAGATTTGCAGGATAGGAACAGAAGAGCAAAATGAATGGTACTTCTTCAGTCATAAAGACAAGAAATATCCAACAGGGACTCGAACAAATAGAGCCACAGCTGCAGGCTTCTGGAAAGCAACAGGAAGAGATAAGGCTATCTATTCCAAGCATGATCTCATTGGGATGAGGAAAACCCTAGTTTTCTATAAGGGTCGAGCCCCTAATGGACAGAAATCTGACTGGATTATGCATGAGTATCGCCTCGAAACCGATGAAAATGGTACTCCTCAGGAAGAAGGATGGGTTGTGTGTAGAGTATTCAAGAAGAGAATAACAACCATAAGGAAAGTGAGTGAGCATGACTCTCCTTGTTGGTATGATGACCAACAAGTCTCAACTTTCATGCAAGAATTGGACTCACCAAAGCACCAAAATCCTCATCCTTCTCATCAACCTAATTTGATGTACCACCAAATCCCCATCAATACTTTTCCTTGCAAGAAAGAGCTGGACCATAATCCTCATCATCACATACCTTTGCTTCACCAGCTTCAAACTCGCCACCACTTCCTCCCCCAGCTTCCACTACTCGATTACCAGAACCCTAAATTGCTTCAATCTTCGGCTCCCACAGCCATAAACCCTAGCAGCAGCAGCAGCAACCTAATGGCACCATATGGTCTTGATCATGTGATGAACCATGCTGTGGCTGAAGATCATCAGCAAACTTTTCCGGCAGCTGCTGTTTATGGCAGAAGTAGCCAAGAACAAGTGGCGGCGGATGATGAACAAGTGACCGATTGGCGGGTACTCGACAAGTTTGTCGCTTCACAACTTAGTCAGGAAGATGTGCCTAGTAATAAGGACCACAACAACAATAATAATGCAGGCACAAGCAGCAGCAGCAACAATATTTTTCAGACCGTGGACAATATTGCTAGTAGTGTACAATTCAGACCATCAAATTTGGAAAAGCAAGAAATGGTTCCTGAAAATGCCTCAACTTCAACCTCAAGTTGCCCAATTGATTTGTGGAAATAG 1437 0.4217 MIQLSLFGSSGFSLRLVIGLYQLRVEVALNNPIFPFFNFSSFPKRFPTNSAPSDRFSQSSSYRREIDLKDLKKEKFRIRKKKRENMNSFSYVPPGFRFHPTDEELVDYYLRKKVTSRRIDLNVIKDVDLYKIEPWDLQEICRIGTEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQEEGWVVCRVFKKRITTIRKVSEHDSPCWYDDQQVSTFMQELDSPKHQNPHPSHQPNLMYHQIPINTFPCKKELDHNPHHHIPLLHQLQTRHHFLPQLPLLDYQNPKLLQSSAPTAINPSSSSSNLMAPYGLDHVMNHAVAEDHQQTFPAAAVYGRSSQEQVAADDEQVTDWRVLDKFVASQLSQEDVPSNKDHNNNNNAGTSSSSNNIFQTVDNIASSVQFRPSNLEKQEMVPENASTSTSSCPIDLWK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1584 478 ProSiteProfiles NAC domain profile. 92 241 IPR003441 GO:0003677|GO:0006355
Alju02g1584 478 SUPERFAMILY NAC domain 88 241 IPR036093 GO:0003677|GO:0006355
Alju02g1584 478 FunFam NAC domain-containing protein 101 245 - -
Alju02g1584 478 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 92 374 - -
Alju02g1584 478 MobiDBLite consensus disorder prediction 411 436 - -
Alju02g1584 478 Gene3D NAC domain 101 244 IPR036093 GO:0003677|GO:0006355
Alju02g1584 478 Pfam No apical meristem (NAM) protein 93 220 IPR003441 GO:0003677|GO:0006355
Alju02g1584 478 MobiDBLite consensus disorder prediction 455 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1584 Alju-ChrAlju02 14137632 14141719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1584 86 478 NAC Transcription Factor Family AT1G12260 51.478 1.04e-126 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g1584 NAM 7.6e-38 No_clan