Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1572 ATGGACCTGAAGTCAAATCACACTCCTGTTCTTACTGATGCTGCACCCATAACGAAATCGAGATTGGGTGTGCATTCCAGTCTATTGCCTTGTTCTCCTACAGGGGCAGCTTTTTCTCCTGGCCTGCTTCTGACAATCCCTAGGAAGAAGACTGGAATTCTTGATGATGTTCGTTCTAGTAGTTGGCTGGATGCCATGAAATCATCTTCTCCTACAGCCAAGAAGATAACAAAGGATATTAATCATGGTTTTTCATCATCTGATGCTGATAGTGCTTATAGTACCTGGCTGCTAAAGTATCCGTCAGCACTTACATCTTTTGAGCAAATCGCAAACCATGCAAAAGGCAAGAGAATAGCATTGTTTTTGGATTATGATGGAACTCTTTCACCAATTGTGGATAATCCTGAGTGTGCTTTCATGTCTGACAATATGCGTGCTGCTGTTAAAAAGGTGGCAGAGCTTTTTCCCACTGCAATAATTAGTGGAAGAAGCCGTGACAAGGTACATGAATTCGTAGGACTAACTGAACTCTATTATGCTGGTAGCCATGGGATGGACATCATTGGTCCCGTGAGACAATCTGTATCTGATAACCATCCTAATTGCATTAGGTCTGCTGACAATCAGGGAAAGGAAGTTAATTTATTCCAACCCGCTGCTGAATTCTTGCCCATGATTGATAAGGTGCTTGATTCCCTCATTGAATGTACAAAAGACATTAAAGGAGCAAAAGTTGAGAACAATAAATTTTGTGTCTCTGTACATTATCGCAACGTAGAGGAGAAGAATTGGAAAATAGTGGGGCAAAGAGTCCTCGATATTCTGAAGGACTATCCACGTTTGCGATTGACCCATGGGCGCAAGGTTTTAGAGGTCCGACCAGTGATTGATTGGGATAAGGGGAAAGCCGTCACATTTTTACTTGAGTCTCTTGGGCTTAGCAACTGTGATGATGTGCTGCCTATATATGTTGGAGATGATCGGACTGATGAAGATGCTTTTAAGGTTTTGAGGGAGGGAAATAAAGGTTATGGCATCCTAGTTGCTTCTGCGCCGAAGGAAAGCAATGCAGTCTACTCTCTTCGTGATCCATCAGAGGTTATGGAATTTCTCAAGACTCTTGTGGTTTGGAAGTCAGGCCACCTGAAAAGTTACATATAG 1164 0.4253 MDLKSNHTPVLTDAAPITKSRLGVHSSLLPCSPTGAAFSPGLLLTIPRKKTGILDDVRSSSWLDAMKSSSPTAKKITKDINHGFSSSDADSAYSTWLLKYPSALTSFEQIANHAKGKRIALFLDYDGTLSPIVDNPECAFMSDNMRAAVKKVAELFPTAIISGRSRDKVHEFVGLTELYYAGSHGMDIIGPVRQSVSDNHPNCIRSADNQGKEVNLFQPAAEFLPMIDKVLDSLIECTKDIKGAKVENNKFCVSVHYRNVEEKNWKIVGQRVLDILKDYPRLRLTHGRKVLEVRPVIDWDKGKAVTFLLESLGLSNCDDVLPIYVGDDRTDEDAFKVLREGNKGYGILVASAPKESNAVYSLRDPSEVMEFLKTLVVWKSGHLKSYI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1572 387 FunFam Trehalose 6-phosphate phosphatase 220 296 - -
Alju02g1572 387 CDD HAD_TPP 120 370 - -
Alju02g1572 387 Pfam Trehalose-phosphatase 122 366 IPR003337 GO:0003824|GO:0005992
Alju02g1572 387 NCBIfam HAD-IIB family hydrolase 121 339 IPR006379 -
Alju02g1572 387 Gene3D - 119 213 IPR023214 -
Alju02g1572 387 Gene3D - 218 385 IPR023214 -
Alju02g1572 387 NCBIfam trehalose-phosphatase 217 376 IPR003337 GO:0003824|GO:0005992
Alju02g1572 387 SUPERFAMILY HAD-like 120 377 IPR036412 -
Alju02g1572 387 FunFam Trehalose 6-phosphate phosphatase 119 208 - -
Alju02g1572 387 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 380 IPR044651 GO:0004805|GO:0005992
Alju02g1572 387 FunFam Trehalose 6-phosphate phosphatase 226 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1572 Alju-ChrAlju02 13983009 13985641 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1572 113 375 Trehalose Biosynthesis Gene Families AT1G70290 25.795 8.99e-11 61.6