Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju02g1540 | ATGCACATCAAGGAAATTTGCTTGGAAGGTTTCAAATCGTATGCTACCAGAACCGTTGTTCCAGGTTTCGATCCCTATTTCAATGCCATCACGGGGTTAAACGGTTCCGGCAAGTCGAACATACTTGATTCGATTTGCTTTGTACTTGGGATCACGAATTTGCAGCAGGTTCGGGCTTCTAACCTTCAGGAGCTCGTGTATAAGCAAGGACAGGCGGGGATTACAAAAGCTACAGTGTCGATTGTGTTTGATAATGCGGATAGGAGTCGAAGCCCTCTTGGATATGAAGACCATCCAGAGATTACAGTGACAAGACAGATTGTAGTTGGTGGAAGGAACAAATATCTGATCAACGGGAAACTTGCCCAGCCTAGTCAAGTTCAAAACCTTTTTCATTCTGTGCAGCTGAATGTTAACAACCCACATTTTCTCATAATGCAAGGGCGCATCACCAAAGTTTTAAATATGAAACCACCTGAGATATTGTCAATGCTTGAGGAAGCTGCAGGAACAAGAATGTATGAGACGAAGAAAGAGGCTGCACTAAAAACACTTGAAAAAAAGCAGAGTAAGGTTGATGAGATTAATAAGCTTCTTGACCAGGAGATACTGCCTGCATTGGAGAAGTTAAGGAAAGAAAGGACGCAGTACATGCAGTGGGCTAATGGCACTGCTGAGTTAGATAAGCTGAGAAGGTTTTGTATTGCTCACGAATATGTTCAAGCAGAGAGGATTAGAGACAATGCAATGTCTGAGGTGGAACAAGTGAAGGCCAAAATAGCTGAGATTGATGACTCTACTAAGACCACAAAGGTGGAAGTACAGGCAATGGAGACCAAAATGACAAGATTGACGGCGGAAAAGGAAGAACGCATGGGCGGGGAAGTGAAATCTTTGTCAGACAAAGTAGATACACTTTCACAGAATCTTGTGAGGGAAACATCTATACTAAATAATAAAGAGGACACTCTGAGAAGTGAAAAATCCAATGAAGAAAATATTGTTAATAATATTGAAGACTTGAAGCAATCTGTTGAAGAGAAGGCCTTAGCTGTGAAAAAGGCTGAAGAGGGAGCTTCTGATCTGAAAAGGAGGGTTGATGAGCTTTCTAAGACCTTGGAGGATCATGAAAAGGAATATCAGGGTGTACTAGCTGGGAAGAGCAGTGGAAATGAGGAGAAATGCTTAGAGGATCAGCTAGCTGATGCAAAGATAGCAGTTGGGAATGCTGAAACAGAATTGAAACAGCTAAAAACTAAAATTAGCCACAGTGAAACAGAACTGAAAGAGAAAGCACATCAATTAAGGTCAAAACAGGTAGAAGCTACTGCTGTGGAAAATGAGCTAAATGCTAGAAAGAAAGATGTGGAGACTGTGAAGACGCAATTGGAGTCTCTTAGTTATAAAGATGGTGAGATGGAATCTTTGCAAAAGGAGCGCGCATCTGAGATGGAGTCAGTGCAAAAGTGGAAGGATGAAATACGCAAGCTTTCAGCACAATTAGCAAATGTTGAGTTTACTTACCGTGACCCAGTCAAGAACTTTGATAGGTCAAAGGTGAAAGGTGTGGTTGCAAGACTTATCAAAGTAAAGGACAGGGCTGCAATGACCGCCCTGGAGGTTACTGCTGGTGGAAAGTTGTTCAATGTTGTAGTTGACACAGAAAATACTGGAAAACAACTACTGCAGAATGGTGATTTAAGAAGAAGAGTGACAATTATACCTTTAAACAAAATTCAATCCCATACTGTTCCCTCTAGAATTCAACAAGCTGCTTCTAGATTGGTTGGTGAGGAGAATGCTGAGCTGGCACTTTCTTTGGTTGGTTATGAAGAAGAATTGAAGAGTGCTATGGAATATGTATTTGGTTCTACCTTTGTGTGCAAAAACACTGATGCTGCTAAGGAGGTGGCATTTAATCGGGAGATTCGAACCCCCAGTGTCACTCTTGAAGGAGACATATTTCAGCCAAGTGGTCTTTTGACTGGTGGAAGCCGAAAGGGTGGCGGCCAACTTTTAAGGCAACTTCATGATTTAGCAGAGGCTGAGTCAAAACTTTCAATACACCAAAGAAGGTTGTCTGAGGTTGAGGCAAAGATTACAAAGCTTCTTCCCCTTGAGAAGAAATGGAAAGACCTCAAAACACAGTTGGAACTTAAATCATATGATCTTTCATTGTTTCAAAGCAGAGCTGAGCAAAATGAGCATCATAAGCTTGGGGAACTAGTGAAGAAGATTGAGCAAGAACTTGCAGAAGCAAAATCTGCAGTCAAGGAAAAGCAAATTATTTATGAAAACTGTGTCAAGGCTGTTTCATCACTTGAGAAATCAATTAAAGAACATGACAATAATCGTGAAAGTAGACTAAAAGATCTGGAGAAGAAGATAAAGTCATTCAAATCCCAAATGCAGTCATCTTTAAAAGATCTTAAGGGACATGATAATGATAAGGAGAGACTTGTAATGGAAATGGAAGCTGTTATTCAGGAGCGTGTGTCCTTGGAGAATCAATTAGCTTCTTTAAGAACGCAGATTCATAATTTTGAATTAGAAGTAGAAGAACAAAAAATAAAGGTTGCTGCTGCAAGGACTGATCATGATCGGGTTCATTCAGAACTAAACTCAGTTCGCCTAAAAATGAAGGAATGTGACAAGGAAATAAGTGTTATCATGAAGGAGCATAAAATGCTTGAACACAAGCTCAGTGAAAATAATCTTGAAAGGAAGAGAATGGAGAACGAGGTAAAAAGGATGGAGATGGAACAAAAAGACTGTTCGGTCAGGGTGGAGAAATTGATAGAGAAACATGCATGGATTACTTCTGAAAAACAGCTGTTTGGCAAAAGTGGGACTGATTATGATTTTTCTTCTCGTGATCCGGGTAAAGCAAGGGAAGAACTTGAGAAGCTACAAGCTGAGCAGTCTGGGCTTGAGAAAAGGGTGAACAAGAAAGTCATGGCGATGTTTGAGAAGGCAGAGGATGAGTACAATGATTTGATATCCAAGAAAAACATAATTGAGAATGACAAGTCTAAAATCAAGAAGGTGATCGAAGAGCTAGATGAGAAGAAAAAGGAAACACTAAGTGTTACCTGGGTTAAAGTCAACAAGGACTTTGGATCCATCTTTTCTACTTTACTTCCGGGGACAATGGCGAAGTTAGAACCCCCTGAAGGTTGCAGTTTTCTTGATGGTCTTGAAGTTCGTGTTGCATTTGGGAGCGTGTGGAAACAGTCCCTGTCAGAACTAAGTGGTGGTCAACGATCATTACTTGCACTTTCTCTGATTCTTGCACTGCTGCTATTCAAACCTGCTCCAATTTACATCCTTGACGAGGTTGATGCGGCACTTGATTTAAGCCACACACAAAACATAGGGAGAATGATAAAGTCCCATTTTCCTCACTCCCAGTTTATTGTGGTTTCACTGAAGGAAGCAAGTGATATATTGAGGTGGCCACGTGTAGCAAATTGTATTAATGTCTTAAGTTTAAGCAGTGTATAG | 3504 | 0.4067 | MHIKEICLEGFKSYATRTVVPGFDPYFNAITGLNGSGKSNILDSICFVLGITNLQQVRASNLQELVYKQGQAGITKATVSIVFDNADRSRSPLGYEDHPEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEAALKTLEKKQSKVDEINKLLDQEILPALEKLRKERTQYMQWANGTAELDKLRRFCIAHEYVQAERIRDNAMSEVEQVKAKIAEIDDSTKTTKVEVQAMETKMTRLTAEKEERMGGEVKSLSDKVDTLSQNLVRETSILNNKEDTLRSEKSNEENIVNNIEDLKQSVEEKALAVKKAEEGASDLKRRVDELSKTLEDHEKEYQGVLAGKSSGNEEKCLEDQLADAKIAVGNAETELKQLKTKISHSETELKEKAHQLRSKQVEATAVENELNARKKDVETVKTQLESLSYKDGEMESLQKERASEMESVQKWKDEIRKLSAQLANVEFTYRDPVKNFDRSKVKGVVARLIKVKDRAAMTALEVTAGGKLFNVVVDTENTGKQLLQNGDLRRRVTIIPLNKIQSHTVPSRIQQAASRLVGEENAELALSLVGYEEELKSAMEYVFGSTFVCKNTDAAKEVAFNREIRTPSVTLEGDIFQPSGLLTGGSRKGGGQLLRQLHDLAEAESKLSIHQRRLSEVEAKITKLLPLEKKWKDLKTQLELKSYDLSLFQSRAEQNEHHKLGELVKKIEQELAEAKSAVKEKQIIYENCVKAVSSLEKSIKEHDNNRESRLKDLEKKIKSFKSQMQSSLKDLKGHDNDKERLVMEMEAVIQERVSLENQLASLRTQIHNFELEVEEQKIKVAAARTDHDRVHSELNSVRLKMKECDKEISVIMKEHKMLEHKLSENNLERKRMENEVKRMEMEQKDCSVRVEKLIEKHAWITSEKQLFGKSGTDYDFSSRDPGKAREELEKLQAEQSGLEKRVNKKVMAMFEKAEDEYNDLISKKNIIENDKSKIKKVIEELDEKKKETLSVTWVKVNKDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPIYILDEVDAALDLSHTQNIGRMIKSHFPHSQFIVVSLKEASDILRWPRVANCINVLSLSSV | 1167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju02g1540 | 1167 | Coils | Coil | 736 | 763 | - | - | |
Alju02g1540 | 1167 | Coils | Coil | 393 | 434 | - | - | |
Alju02g1540 | 1167 | Pfam | RecF/RecN/SMC N terminal domain | 2 | 1145 | IPR003395 | - | |
Alju02g1540 | 1167 | Coils | Coil | 178 | 198 | - | - | |
Alju02g1540 | 1167 | Gene3D | - | 801 | 995 | - | - | |
Alju02g1540 | 1167 | Coils | Coil | 982 | 1026 | - | - | |
Alju02g1540 | 1167 | Coils | Coil | 324 | 379 | - | - | |
Alju02g1540 | 1167 | FunFam | Structural maintenance of chromosomes 2 | 518 | 584 | - | - | |
Alju02g1540 | 1167 | Coils | Coil | 894 | 928 | - | - | |
Alju02g1540 | 1167 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3 | 1 | 1145 | - | - | |
Alju02g1540 | 1167 | SUPERFAMILY | Tropomyosin | 682 | 892 | - | - | |
Alju02g1540 | 1167 | Coils | Coil | 239 | 266 | - | - | |
Alju02g1540 | 1167 | Gene3D | - | 577 | 667 | - | - | |
Alju02g1540 | 1167 | CDD | ABC_SMC2_euk | 1 | 156 | IPR027120 | GO:0005524|GO:0016887 | |
Alju02g1540 | 1167 | SMART | SMC_hinge_2 | 518 | 638 | IPR010935 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
Alju02g1540 | 1167 | PIRSF | SMC | 1 | 1147 | IPR024704 | GO:0005524|GO:0016887 | |
Alju02g1540 | 1167 | Gene3D | - | 996 | 1152 | IPR027417 | - | |
Alju02g1540 | 1167 | Coils | Coil | 789 | 809 | - | - | |
Alju02g1540 | 1167 | Coils | Coil | 473 | 507 | - | - | |
Alju02g1540 | 1167 | Coils | Coil | 817 | 865 | - | - | |
Alju02g1540 | 1167 | FunFam | Structural maintenance of chromosomes 2 | 1 | 202 | - | - | |
Alju02g1540 | 1167 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1 | 1143 | IPR027417 | - | |
Alju02g1540 | 1167 | SUPERFAMILY | Smc hinge domain | 476 | 686 | IPR036277 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
Alju02g1540 | 1167 | Pfam | SMC proteins Flexible Hinge Domain | 518 | 638 | IPR010935 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
Alju02g1540 | 1167 | Coils | Coil | 679 | 699 | - | - | |
Alju02g1540 | 1167 | Gene3D | - | 518 | 677 | - | - | |
Alju02g1540 | 1167 | Gene3D | - | 1 | 203 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju02g1540 | Alju-ChrAlju02 | 13637509 | 13646583 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju02g1540 | 2 | 170 | Structural Maintenance of Chromosomes family | AT5G15920 | 23.077 | 1.97e-07 | 53.5 |