Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1527 ATGTCATTAAGAATTAATGGTGTTGATGATAATGAAGAACAAGAAAGGAGATGGGAAAATCTGCCTCGAGAATTGCTTTGGGACATAATAAAGAGAGTGGAAGAGACTGAGACATGTTGGCCTTCACGTGTAATTCTATCTTGTGCTTCAGTTTGTAAGTCATGGAGAAAAATCACAAAGGAGATTGTTAAGAGTCCTGAGCTATCTGGACGACTCACTTTTCCCATCTCATTGAAGCAACCAGGGCCTATAGATTTTCCAATCCAGTGCTATATCAAAAGGAACAGAGAAACCTCTACTTATTTGTTGTACTTGGGTCCTGAGCCATCAGAGAATAAGAATGATAAGTTGTTGCTGGCTGCCAAAAGAAAACAAAGGATAAGAAATATAAAATATGTAATCTCTTTAGTTGCTGATGACTTTCGTCGGACCAGCGAGACATATGTTGGCAAACTCAGGTCTAATTTCTTCGATTACAAGTTCAGTATATATGACAGACAATATCCATCACAAGATGAAGCTGCAGCTGCAGGAGGAAACAAGATGTCGTCTCTACGAAAGTACAAAGTTGGTACCATAAAATACAAGAACAACACGATTCACAAGTACAGATTTCACAGTATCAAAGGTCCAAGAAAAATGAAGTGCCTCATGAAGATGATGATGAACTACTCTGCTAATAATAATAATAAGGTGGATTATCATCAGCCTCCTCTGAAACTTAAAAGCAAGGATCCCATATGGGATGAAGAATGCCAACACTGGCATCTCAACTTCAGGCATCATGATACTTTGGCTTTTGATAATTTCCAGCTTGTTTCTGCTGCTGACGACGATGATGACGGCGATGATGACGAAGATGAAGAAGAAGAAGAAGAAAAGGTAATTTTGGAATTTGCCAAGATAGAGGAAGATGTGTTTATTATGGATTACTGCTATCCACTCTCAGCATTTCAAGCCTTTGCTATCTGTCTCAGCAACTTTGATGCCAAACCAATCAGTGATTGA 1008 0.3879 MSLRINGVDDNEEQERRWENLPRELLWDIIKRVEETETCWPSRVILSCASVCKSWRKITKEIVKSPELSGRLTFPISLKQPGPIDFPIQCYIKRNRETSTYLLYLGPEPSENKNDKLLLAAKRKQRIRNIKYVISLVADDFRRTSETYVGKLRSNFFDYKFSIYDRQYPSQDEAAAAGGNKMSSLRKYKVGTIKYKNNTIHKYRFHSIKGPRKMKCLMKMMMNYSANNNNKVDYHQPPLKLKSKDPIWDEECQHWHLNFRHHDTLAFDNFQLVSAADDDDDGDDDEDEEEEEEKVILEFAKIEEDVFIMDYCYPLSAFQAFAICLSNFDAKPISD 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1527 335 PRINTS Tubby superfamily signature 241 258 IPR000007 -
Alju02g1527 335 PRINTS Tubby superfamily signature 132 148 IPR000007 -
Alju02g1527 335 PRINTS Tubby superfamily signature 313 335 IPR000007 -
Alju02g1527 335 PRINTS Tubby superfamily signature 148 172 IPR000007 -
Alju02g1527 335 PRINTS Tubby superfamily signature 292 311 IPR000007 -
Alju02g1527 335 SUPERFAMILY F-box domain 7 60 IPR036047 GO:0005515
Alju02g1527 335 Pfam Tub family 78 329 IPR000007 -
Alju02g1527 335 Pfam F-box domain 18 63 IPR001810 GO:0005515
Alju02g1527 335 PANTHER TUBBY-RELATED 12 331 - -
Alju02g1527 335 Gene3D - 10 68 - -
Alju02g1527 335 Gene3D Tubby Protein; Chain A 75 335 IPR025659 -
Alju02g1527 335 SUPERFAMILY Tubby C-terminal domain-like 66 332 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1527 Alju-ChrAlju02 13450980 13454081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1527 18 332 TUB Transcription Factor Family AT2G18280 47.324 1.08e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TUB Alju02g1527 Tub 1.3e-65 CL0395