Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1517 ATGTCTTCCAGGTTTATAGCAATTGCGGCTGTTATTACAGCTTTAAGCTTTGTGGGTGTACAATTTCGCTCGGAGTTGGCGTTCAATCAACTGAAATCAGAGGGAATAATTGGCAAGAATTTAATTCACTTGGATAAGGAGAATGCCGATCATGTCATTGAGTTGTTTTCGGGGTCGTCCACCACTATATGGTTACTCGCAAGTTTTGTGATCAATGCATTTATCCTTCTCAATCTTTGTCTCAAGACTATATTTTTCTCTGAGTTGTATCCTGCTGAAATTCGCAAGCTGGTTGAATGTCTCATTAATTATGTCATCTACAAGGGGGCATTTCTACCAATGATTGTGCCTCCGACAATAAATCAGGCAGGTCTATGGTCTAGTTGGATGATAGTGCTATGCTCTTTAAAGATGTTTCAAACTTTGGCCAAAGATCGTTTAGAGCGATTGAATGCATCTCCATCTGCCAAACCCTGGACTTATGGTCGTGTATATTCAGCATTATTGTTGGTTTCTTTGGTTGATTTATTTTGGATAAGGCTATGTCTGACTATATATAAAACACACCCATCCTCTACGCTTCTGTTGCTGTTCTATGAGCCTCTAAGTATCGCTTGTGAGACCCTGCAGGCTATTTTGGTACATGGGTTTCAATTGCTTGATATATGGCTCCATCATTCAGCATGCAATAACTCTGACAGTGGAAGGTCAAAACTGTTTGACACATTTGCAGCAGGATCATTAATGGAATGGAAGTGGAGTCTTATTCGGAATTTGGGATTTTCACTTGACATGGCAGCTTCTTTGACAGCTCTTGGCCATTACTTGCATGTTTGGTGGCTTCATGGCATAGCTTTCCATGTTGTAGATGCAGTGCTATTTCTAAACATACGAGTAAATATTTGTACACTGCTAAGTGCTCTTGTAAATCGCATGAGAGCCTATATAAGGTTAAGGACAGCTTTAGGTGCACTACATGCAGCTCTTCCTGATGCAACTACGGAGGAGCTACTGTCATATGATGATGAATGTGCTATTTGTAGGGAGCCCATGGCGAAGGCTAAAAAGTTAAAATGCAAACACCTTTTCCATCTTGCGTGTTTGAGATCTTGGTTAGATCAAGGATTGACAGAGATGTATACTTGTCCGACATGTCGGAAGCCTCTCTTTGTTGCCCAGCCTCAAAATGAGGTAAGTTTCAATATGCGGGAAACATCAAGTGAAGAGCCACGCACACAACAAATAGGTTCAGGGCTTGATCAGCCAAACACTGGCAGACATACCATGGCTGCTGGATTATTTCCCAACCAGACACCAAATATGGAAGGCATTTCTTGGAGGGGTGCAGCAGGACTGGACTCACCTTGGTTGCATTCTTGGCCAAATCAAGGTGTTGATGGGGCTGGTCCATCTACTGCAATCAGATCCGTTGGATTAGGAAGGGTTCAAATGATGATGAGACATCTTGCATCTGTTGGAGAAAATGCTCAGAATGCCCTTGAAGATACTGCCTGGAGCCTTTGGCCCATCAATACTTCTCAGGCTTCTGCAAGTGGTTTGCGGATTCCTCCTCCTCATGGGAGGATCCCTGGAGGCTCGGATAATCTACATATGAGGAATGCCCCACGTTTTGCTAATGATAATCTGGCAAATATACTGGCCATGGCTGAGACTGTTCGGGAGGTTCTACCTCATATACCAGATGACATGATTTTCCAGGACTTGCAGCGGACAAATTCTGTGTCAGTTACAGTGAATAATCTTCTCCAAATGTGA 1776 0.4291 MSSRFIAIAAVITALSFVGVQFRSELAFNQLKSEGIIGKNLIHLDKENADHVIELFSGSSTTIWLLASFVINAFILLNLCLKTIFFSELYPAEIRKLVECLINYVIYKGAFLPMIVPPTINQAGLWSSWMIVLCSLKMFQTLAKDRLERLNASPSAKPWTYGRVYSALLLVSLVDLFWIRLCLTIYKTHPSSTLLLLFYEPLSIACETLQAILVHGFQLLDIWLHHSACNNSDSGRSKLFDTFAAGSLMEWKWSLIRNLGFSLDMAASLTALGHYLHVWWLHGIAFHVVDAVLFLNIRVNICTLLSALVNRMRAYIRLRTALGALHAALPDATTEELLSYDDECAICREPMAKAKKLKCKHLFHLACLRSWLDQGLTEMYTCPTCRKPLFVAQPQNEVSFNMRETSSEEPRTQQIGSGLDQPNTGRHTMAAGLFPNQTPNMEGISWRGAAGLDSPWLHSWPNQGVDGAGPSTAIRSVGLGRVQMMMRHLASVGENAQNALEDTAWSLWPINTSQASASGLRIPPPHGRIPGGSDNLHMRNAPRFANDNLANILAMAETVREVLPHIPDDMIFQDLQRTNSVSVTVNNLLQM 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1517 591 Pfam CUE domain 555 591 IPR003892 GO:0043130
Alju02g1517 591 ProSiteProfiles Zinc finger RING-type profile. 344 386 IPR001841 -
Alju02g1517 591 CDD CUE_RIN3_plant 552 589 IPR035667 -
Alju02g1517 591 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF8 49 591 - -
Alju02g1517 591 FunFam E3 ubiquitin protein ligase RIN2 550 590 - -
Alju02g1517 591 FunFam E3 ubiquitin protein ligase RIN2 317 396 - -
Alju02g1517 591 SMART ring_2 344 385 IPR001841 -
Alju02g1517 591 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 317 397 IPR013083 -
Alju02g1517 591 MobiDBLite consensus disorder prediction 401 423 - -
Alju02g1517 591 CDD RING-H2_AMFR 342 389 - -
Alju02g1517 591 ProSiteProfiles CUE domain profile. 551 591 IPR003892 GO:0043130
Alju02g1517 591 Pfam Ring finger domain 342 386 IPR001841 -
Alju02g1517 591 SUPERFAMILY RING/U-box 330 393 - -
Alju02g1517 591 Gene3D - 550 590 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1517 62 399 C3H Transcription Factor Family AT3G16090 27.248 6.00e-28 115