Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1480 ATGTCAACAGTGAGAGATCCTGCTATAAAGCTATTTGGTAGAGATATTCCTGTAGATTCAACACGCAACACCGATTCGTCTCAAGTTCTGAACAGGATTGATGAATCAACGATTGAAGGAAATGTTCCTTCCAGATCTGGCAAGAAGCATAATCCTATTGAAGAAGCAGGCAGAAACGTTTCTAGAAGTCCTACTTTTGAAGTGGAGGCTAAGGTAGTTCATAGAACAAAGGACTACAAGGCTGGTAGTAAGGATATGGATCATCAAGAAAAAGTTTTCAAGAAACCAGATAAGGTGCTGCCTTGTCCTCGCTGCAACAGCTTGGAGACTAAGTTTTGCTATTTCAATAATTATAATGTGAATCAACCTAGGCATTTCTGCAAAAACTGCCAAAGATATTGGACAGCTGGGGGGATAATTAGAAATGTTCCCGTGGGGGCTGGAAAGCGCAAAAATAAACATTCTCCATTACCGGTTGGCCAAGATATAGCATCTGTTGCCCACATAGACTCCAACTCTCTTCCTACAGCTTCAATACCTAGTGGAGGAATGGGAAATAGCCCTAGAATTGGTGAGGAAGCTCCTCTTTGTGAATCCTTGGAAACCATGTTAAATCTAAAAGGCCAGAAAAAAACTGAAGTTGACTCCTCTATTGGTGATGATGATAGTGAGGAGCCTTCCAGAGATTTTGAATCCAGGGAAAAGGAATGCTCAGAAAATGAAATTGAGCAGGTAGGTCTTCAACAACATTTAAATGGTTTTAATCCTCTACATCCACTTCATTATTATCCCGTGCCTTCTTGGGCGTACCAATGGAATCCGTGTTGGAATTCGGTGGTATTTAGACCCGGTCCTGCTTATATGGGCTCTGCGACTATGATGGCAATCCCAGGTTTCACTGCACCAACAATAGAATTATCAGCAGCACCATTTTATTCGAGTCCCGTGCCAAGCTGGACTGGCCAGAAGGAAGATTCTCCATTTGGTGGCTCTACATTTAGTGGCATCCCATCACCTTCCTCTTCTACTAGCAACAGTGCTTGTTCTGGGACTAAGTCTCCAACATTGGGAAAACATTCAAGGGATGCAAGTACTCAGACAGGTGATGCAATGAGACAGAATCTTTGGGTACCTAAGACTCTGAGAATTAATGATCCAGAAGAAGCTGCAAGGAGTTCTATATGGTCCGCTTTTGGTGCAAAGGTTGAACAGAACAAACCGATTATCAAAGGCAGCGTTTTTAAATCTTTTGAACCTAAGTCAGAAGGTGCAAGATCTCATACTTCAAATAGTGACCAAATTCTGAGTGCAAACCCTGCTGCTTTTTCTCGCTCAGAATCATTTCAGGAAAGAATGTAA 1359 0.4216 MSTVRDPAIKLFGRDIPVDSTRNTDSSQVLNRIDESTIEGNVPSRSGKKHNPIEEAGRNVSRSPTFEVEAKVVHRTKDYKAGSKDMDHQEKVFKKPDKVLPCPRCNSLETKFCYFNNYNVNQPRHFCKNCQRYWTAGGIIRNVPVGAGKRKNKHSPLPVGQDIASVAHIDSNSLPTASIPSGGMGNSPRIGEEAPLCESLETMLNLKGQKKTEVDSSIGDDDSEEPSRDFESREKECSENEIEQVGLQQHLNGFNPLHPLHYYPVPSWAYQWNPCWNSVVFRPGPAYMGSATMMAIPGFTAPTIELSAAPFYSSPVPSWTGQKEDSPFGGSTFSGIPSPSSSTSNSACSGTKSPTLGKHSRDASTQTGDAMRQNLWVPKTLRINDPEEAARSSIWSAFGAKVEQNKPIIKGSVFKSFEPKSEGARSHTSNSDQILSANPAAFSRSESFQERM 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1480 452 MobiDBLite consensus disorder prediction 213 236 - -
Alju02g1480 452 MobiDBLite consensus disorder prediction 418 452 - -
Alju02g1480 452 PANTHER CYCLIC DOF FACTOR 2 4 451 IPR045174 GO:0003700|GO:0006355
Alju02g1480 452 MobiDBLite consensus disorder prediction 315 373 - -
Alju02g1480 452 ProSiteProfiles Zinc finger Dof-type profile. 100 154 IPR003851 GO:0003677|GO:0006355
Alju02g1480 452 MobiDBLite consensus disorder prediction 36 62 - -
Alju02g1480 452 Pfam Dof domain, zinc finger 97 154 IPR003851 GO:0003677|GO:0006355
Alju02g1480 452 MobiDBLite consensus disorder prediction 423 445 - -
Alju02g1480 452 ProSitePatterns Zinc finger Dof-type signature. 102 138 IPR003851 GO:0003677|GO:0006355
Alju02g1480 452 MobiDBLite consensus disorder prediction 208 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1480 Alju-ChrAlju02 12708271 12710663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1480 4 450 C2C2-Dof Transcription Factor Family AT5G39660 33.984 3.30e-67 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju02g1480 zf-Dof 1e-31 No_clan