Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1477 ATGATGAAGAGGTATTCCAGTGCTTCTTCTTCCTCTTGCTCTTCTTCTTCTCCATCTCCGTCGCCTTCTTCGTCGTCGTCTTCTTCTCTCGAGTTTCGGAATCCTGATCAGATGGAAGCGCGAGGCAGAGCAAGTAATAAGCGAGCCAGAAGAAGTGGTAACGGTAAGGGTAATGGTAATGGCAGTGGTAATAATGATGATAATAAGTCGAAGAAGGTGAAAGCTATAAGCTCGAGCTCTTCCGCCATTAATGGCGGACGAAGAAGTTCCGTTTACAGAGGAGTCACTAGGCATCGATGGACTGGGAGGTTTGAAGCTCATCTCTGGGATAAGAGTTGCTGGAATAATCTCCAGAACAAGAAGGGACGACAAGGGGCCTATGACAATGAAGAAGCCGCCGCTAGAACCTATGATCTTGCTGCTCTTAAATACTGGGGAAGAGATTCAACATTGAATTTCCCGATAGAAATATATGCCAAGGAGCTTGAGGAAATGGAGCAGGTCACAAAAGAAGAGTACTTGGCTTCATTGCGACGACAAAGCAGTGGATTTTCTAGAGGTGTTTCTAAGTATCGAGGGGTGGCTAGGCATCACCATAACGGCAGATGGGAAGCTCGGATTGGAAGAGTCTTGGGCAACAAATATCTCTACTTGGGCACATATAGTACTCAAGAAGAAGCGGCTACAGCATACGATTTGGCGGCTATACAATACAGAGGCGCAAATGCAGTCACCAATTTCGATAGTAGCAGATACATCGACAAGATCAACATAATTAACCAGAGCAGCAATGGCGAATCCCAAGAAAATCAAACAGTAATCACAATACCATCACAGGTAGAAGAAATAGAAGAAGCACCTCCCAATTCATCCTCCTCATGTTCCTCCGAGTCAGAAAATCTGCAGAACCAGAAGCAACCACCACAACAGCAACTGCAAGACCAAGAAATCGAACCTGAAAATCCTCAAATTCAACCTAATCAGATCTCTCCACTGAAAGAAGAATCCTCTCCGATTGGTCATGTGGACCCTACTACGACGACCACCGACGAACAGGAGCTTCCATGGATTTTCATGGACGACGACGGATTCTCTCAGTTTCAAGTTCCAGATCTGTCTGACGGCGACTTATTGAGCGTGTTCGGTGATGGCGCACGAAGATTCGACGACGACATTGGATTTCTGTTCAGGCCAGATCCCGAGGAGGCCGATTTCAACCTGGACGCCATTTTGAGCAGTCCGAGCTATGGGGACTTGGCGATGGCGGATTCGACGAGGATGGTGGCTGATGATGATTGTGGGCAAGAGAAGTTGCTCTGTTCAGCAAATTCCGCTTCTTGTTCACCAAACTCTTCAATTTATTATTCAGATTATACTTCATAA 1383 0.462 MMKRYSSASSSSCSSSSPSPSPSSSSSSSLEFRNPDQMEARGRASNKRARRSGNGKGNGNGSGNNDDNKSKKVKAISSSSSAINGGRRSSVYRGVTRHRWTGRFEAHLWDKSCWNNLQNKKGRQGAYDNEEAAARTYDLAALKYWGRDSTLNFPIEIYAKELEEMEQVTKEEYLASLRRQSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTYSTQEEAATAYDLAAIQYRGANAVTNFDSSRYIDKINIINQSSNGESQENQTVITIPSQVEEIEEAPPNSSSSCSSESENLQNQKQPPQQQLQDQEIEPENPQIQPNQISPLKEESSPIGHVDPTTTTTDEQELPWIFMDDDGFSQFQVPDLSDGDLLSVFGDGARRFDDDIGFLFRPDPEEADFNLDAILSSPSYGDLAMADSTRMVADDDCGQEKLLCSANSASCSPNSSIYYSDYTS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1477 460 MobiDBLite consensus disorder prediction 51 66 - -
Alju02g1477 460 CDD AP2 90 155 IPR001471 GO:0003700|GO:0006355
Alju02g1477 460 Gene3D AP2/ERF domain 91 157 IPR036955 GO:0003700|GO:0006355
Alju02g1477 460 Gene3D AP2/ERF domain 189 249 IPR036955 GO:0003700|GO:0006355
Alju02g1477 460 FunFam AP2-like ethylene-responsive transcription factor 189 250 - -
Alju02g1477 460 MobiDBLite consensus disorder prediction 1 34 - -
Alju02g1477 460 CDD AP2 189 250 IPR001471 GO:0003700|GO:0006355
Alju02g1477 460 MobiDBLite consensus disorder prediction 282 353 - -
Alju02g1477 460 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Alju02g1477 460 PRINTS Ethylene responsive element binding protein signature 230 250 IPR001471 GO:0003700|GO:0006355
Alju02g1477 460 SUPERFAMILY DNA-binding domain 189 249 IPR016177 GO:0003677
Alju02g1477 460 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 32 321 - -
Alju02g1477 460 FunFam AP2-like ethylene-responsive transcription factor 90 156 - -
Alju02g1477 460 Pfam AP2 domain 90 146 IPR001471 GO:0003700|GO:0006355
Alju02g1477 460 Pfam AP2 domain 189 240 IPR001471 GO:0003700|GO:0006355
Alju02g1477 460 SUPERFAMILY DNA-binding domain 90 156 IPR016177 GO:0003677
Alju02g1477 460 MobiDBLite consensus disorder prediction 1 87 - -
Alju02g1477 460 SMART rav1_2 91 160 IPR001471 GO:0003700|GO:0006355
Alju02g1477 460 SMART rav1_2 190 254 IPR001471 GO:0003700|GO:0006355
Alju02g1477 460 ProSiteProfiles AP2/ERF domain profile. 91 154 IPR001471 GO:0003700|GO:0006355
Alju02g1477 460 ProSiteProfiles AP2/ERF domain profile. 190 248 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1477 Alju-ChrAlju02 12672378 12679724 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1477 86 252 AP2-EREBP Transcription Factor Family AT5G57390 70.588 2.61e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Alju02g1477 AP2 1e-08 CL0081