Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1473 ATGGAAACCAGAAAGCTCTCAGATGAATATGAAGTTTCAGAGATCCTAGGAAGAGGAGGATTCTCTGTTGTCAGAAAAGGCATTAAAATATCAGGCAGTGAAAAAACCCAGGTAGCCATAAAAACACTCAGAAGAGCAGTAAGTAACTCTCATAATTTTGGATTCCCAAGAACAAATCAGAAAGGTAACAACAACAAGAGTATAGCTTCTTCCATGGGGTTCCCAACATGGAGACAAGTTTCAATATCAGATGCTTTACTCACCAATGAGATCTTGGTCATGAGGAAGATAGTAGAAAACGTTTCACCACATCCAAATGTGATTGAACTCTATGATGTCTATGAGGACTCAAATGGGGTCCATCTTGTTCTTGAGCTTTGCTCTGGGGGCGAGCTGTTTGACAGGATTGTGGCTCAAGAAAAGTACTCAGAGGCAGAAGCCGCGGCCGTGATTCATCAGATTGCACGAGGGCTAGAGGCTATTCATAGAGCTAATATTGTGCATAGGGACTTGAAGCCTGAGAATTGCTTGTTCCTGGACAGTAGAAAGGATTCTCCTCTGAAGATCATGGACTTTGGGTTGAGTTCTGTGGTGGAATTTACTGACCCAGTTGTTGGCTTGTTTGGATCCATTGATTATGTTTCACCTGAGGCTCTTTCTCAAGGAAGGATTACTAATAAGAGTGATATGTGGTCTGTGGGAGTGATTCTTTATATCTTACTCTCTGGGTATCCGCCTTTCATCGCTCAGAATAATCGCCAAAAGCAACAAATGGTCATGACTGGGAGTTTCAGTTTCTATGAGAAGACTTGGAAAACCATTTCCTCACCAGCAAAGCAATTGATTTCAAGTCTCCTAGCCGTTGATCCTGATAGGAGACCTAGTGCACAAGAGCTTCTCACTCATCCATGGGTCAGAGGAGAAAAAGCTAAAGGTGATCAGATGGATCCTGAGATTGTAGACAGATTGCAAAAGTTTAATGCTCGTCGCAAACTCCGTGCTGCTGCAATTGCCAGCTTATGGAGTAGTACAGTCTTCTTGAGAATCAAAAATTTGAAATCCTTGTTGGGATCCTATGATCTTACACAAGAGGAAATTGAGAATCTCAAGATTCACTTCAAGGAAATCTGTGCTGATAGAGACAATGCCACTCTCCCTGAATTTGAGGAGGTGCTAAGAGCAATGAATATGTCATCACTTGTCCCTCTGGCGCCGCGCATATTCGACATATTTGACAACAATCAGGATGGAACGGTCGACATGCGCGAGATTCTCTGTGGATTTTCCAGCCTTAAGAATTCCAAAGGCGATGATGCTCTCCGCCTCTGCTTCCAGATGTATGACACAGACCGATCTGGGTGCATTACTAAGGAAGAAGTAGCATCTATGCTCACAACTTTGCCGGAAGACTGTCTGCCGGCTGACATCTTCGAACCGGGCAAATTAGATGAGATATTTGACCTCATGGATGCCAATAGTGATGGAAAAGTCACCTTTGAAGAATTCAAAGCTGCTATGAAAAGAGATAGTTCTTTGCAAGACGTAGTCCTTTCTTCCCTCCGCCCATCATAG 1572 0.4332 METRKLSDEYEVSEILGRGGFSVVRKGIKISGSEKTQVAIKTLRRAVSNSHNFGFPRTNQKGNNNKSIASSMGFPTWRQVSISDALLTNEILVMRKIVENVSPHPNVIELYDVYEDSNGVHLVLELCSGGELFDRIVAQEKYSEAEAAAVIHQIARGLEAIHRANIVHRDLKPENCLFLDSRKDSPLKIMDFGLSSVVEFTDPVVGLFGSIDYVSPEALSQGRITNKSDMWSVGVILYILLSGYPPFIAQNNRQKQQMVMTGSFSFYEKTWKTISSPAKQLISSLLAVDPDRRPSAQELLTHPWVRGEKAKGDQMDPEIVDRLQKFNARRKLRAAAIASLWSSTVFLRIKNLKSLLGSYDLTQEEIENLKIHFKEICADRDNATLPEFEEVLRAMNMSSLVPLAPRIFDIFDNNQDGTVDMREILCGFSSLKNSKGDDALRLCFQMYDTDRSGCITKEEVASMLTTLPEDCLPADIFEPGKLDEIFDLMDANSDGKVTFEEFKAAMKRDSSLQDVVLSSLRPS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1473 523 FunFam calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 348 517 - -
Alju02g1473 523 SUPERFAMILY Protein kinase-like (PK-like) 4 317 IPR011009 -
Alju02g1473 523 Gene3D - 348 516 - -
Alju02g1473 523 Pfam EF-hand domain pair 438 507 IPR002048 GO:0005509
Alju02g1473 523 ProSiteProfiles Protein kinase domain profile. 10 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1473 523 ProSitePatterns EF-hand calcium-binding domain. 412 424 IPR018247 -
Alju02g1473 523 ProSiteProfiles EF-hand calcium-binding domain profile. 477 512 IPR002048 GO:0005509
Alju02g1473 523 FunFam Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase DMI-3 1 128 - -
Alju02g1473 523 CDD STKc_CAMK 10 304 - -
Alju02g1473 523 Gene3D Phosphorylase Kinase; domain 1 76 131 - -
Alju02g1473 523 Gene3D Transferase(Phosphotransferase) domain 1 132 320 - -
Alju02g1473 523 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Alju02g1473 523 CDD EFh 406 465 IPR002048 GO:0005509
Alju02g1473 523 SMART efh_1 439 467 IPR002048 GO:0005509
Alju02g1473 523 SMART efh_1 403 431 IPR002048 GO:0005509
Alju02g1473 523 SMART efh_1 481 509 IPR002048 GO:0005509
Alju02g1473 523 SMART serkin_6 10 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1473 523 ProSitePatterns Protein kinases ATP-binding region signature. 16 41 IPR017441 GO:0005524
Alju02g1473 523 ProSitePatterns EF-hand calcium-binding domain. 448 460 IPR018247 -
Alju02g1473 523 PANTHER SERINE/THREONINE-PROTEIN KINASE 5 482 - -
Alju02g1473 523 Gene3D Phosphorylase Kinase; domain 1 2 57 - -
Alju02g1473 523 CDD EFh 440 507 IPR002048 GO:0005509
Alju02g1473 523 Pfam EF hand 408 423 IPR002048 GO:0005509
Alju02g1473 523 ProSiteProfiles EF-hand calcium-binding domain profile. 406 434 IPR002048 GO:0005509
Alju02g1473 523 Pfam Protein kinase domain 95 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1473 523 FunFam Calcium and calcium/calmodulin-dependent serine/threonine-protein kinase 132 322 - -
Alju02g1473 523 SUPERFAMILY EF-hand 350 514 IPR011992 -
Alju02g1473 523 Gene3D - 321 346 - -
Alju02g1473 523 ProSitePatterns EF-hand calcium-binding domain. 490 502 IPR018247 -
Alju02g1473 523 ProSiteProfiles EF-hand calcium-binding domain profile. 435 470 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1473 Alju-ChrAlju02 12645761 12650300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1473 96 511 EF-hand Containing Proteins AT4G04720 34.293 3.81e-77 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Alju02g1473 Pkinase 8.3e-59 CL0016