Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1469 ATGAAGGACCTGAACAACCATTGTGATGATGTCGAGTACTATCAGCATGCATGCATTTCAAAAACTGCCTCTTCCGATAAAGTCTCTTTGCAATTTCTTCACCTCTTCACGCCAGCTTGTATTTCTGGTTTAGCGCTACGTCTTCTTCTTCCTCCTCCTCCTCACTTGTTGCAGCACTTAATCCAAGGAATGGCTTCTTCAAGTTCTAACAAGGGAGCTGATAAGTACGAGTCAAGTTCACCTCTTCCCCCGGCCCTTCGTCCACCTGGAGAATCAGAAAAAGCTTACATGCCTGTGAAGAAAACATCAGATAGAAAGCTCTTACCTATGGCCAGGCGTGGTTTTGGATCCAAGGGACAAAAGATTCAACTTCAGACTAACCACTTTAAAGTTGCTCTCTTTTATGAAGATAATCGCCCTTGTTCTGATTTGTTTCCTCACTTTGTGAATTTTATTTCCAGGGTTGGAAGGAATGGAAGCCCTGACAACAGAGAGGGAACAGATAAAAAGAGAATGAGGCGTCCATATCAATCCAAGACATTCAAGGTGGAGATCAGTTATGCTAAGAAAATCCCTATGCAAGAAATTGTAGATGCATTGAGCGGTCTAGAATCTGATCATCACCAAGAAACATTTCGGGTTCTGGACATCATATTAAGGCAGCATGCAGCAAAGCAGGGCTGTCTACTTGTGCGTCAATCATTCTTCCATGACAGAGTGGAAAATTACAAAGAAATTGGAGGTGGTGTTCAAGGTTGTCGTGGATTTCATTCGAGTTTCCGAGCCACTCAAGGGGGTTTGTCCCTGAATGTTGATGTGTCAACAACATTGCTTCTTAAGCCTGGTCCAGTGTTGGATTTCCTCTGCGCGAATCAAGATGTTAAACACCCCCGTTTTATAGATTGGACCAAGCTCTGTACTTTGGTTTCATTGCAACGCTACACTAAGGCCCTTACTAGTATGCAAAGAGCTTCCCTTGTGGAGGTGTCAAGGCAAAAGCCCCGTGACCGAATGACATCTCTGTCAAATCTTAAGTTTGGTGGGATGAATTCACTTTTGGCAATAGAGCGTTCTCTTTCTATACCTATGGTTTCACAGGTGCCTACCTTAATTCTTGGCATGGATGTTTCACATGGCTCTCCTGGTCGATCAGATGCACCTTCTATTGCTGCGGTTGTCAGCTCAAGATACTGGCCTCAAATTTCATGTTATAGAGCATCAGTTCATGCTCAATCACCAAAAGTTGAGATGATTACTAATCTGTTCAATTTTGTTTCTGATACTAAGGATGATGGTATTTTCAAAGAGCTACTCGATGACTTCATTGATACTTCAAGAAGGAGGCCGGATCATATTGTCATATTCAGGGATGGAGTAAGTGAGTCACAATTCAATCAAGTATTGAACATTGAGTTGCAAAAAATCATTCAGGCATGCAAGCATTTTCAAGAAAGTTGGGATCCAAAGTTTACTGTGATTATAGCCCAAAAAAATCATCACACTAAGTTCTTCCAGGCTAATGCTCAAGAAAATGTCCCCCCAGGAACTGTCATTGATAGTAGAATCTGTCACCCTAAGAGCAACGATTTTTACATGTGTGCTCATGCTGGGATGATTGGAACAAGTCGACCTACTCATTACCATGTACTACATGATGAAATTGGTTTCTCTGCTGATGGTTTGCAAGAACTTGTTCATTCTCTTTGTTATGTGTATCAGAGAAGCACAACAGCTATATCAGTAGTTGCCCCAATTTGTTATGCTCACTTAGCAGCAACACAAGTGGCACAGTTTATCAAGTTCGATGAACTTTCAGAGTCTTCTCCTAGTCATGGGGGACTCACTTCAGTTGGTACACCTCAAGTGCAAGAGTTACCTCGTCTTCATGAAAAAGTCCGCAATTCCATGTTCTTCTGTTAG 1920 0.4214 MKDLNNHCDDVEYYQHACISKTASSDKVSLQFLHLFTPACISGLALRLLLPPPPHLLQHLIQGMASSSSNKGADKYESSSPLPPALRPPGESEKAYMPVKKTSDRKLLPMARRGFGSKGQKIQLQTNHFKVALFYEDNRPCSDLFPHFVNFISRVGRNGSPDNREGTDKKRMRRPYQSKTFKVEISYAKKIPMQEIVDALSGLESDHHQETFRVLDIILRQHAAKQGCLLVRQSFFHDRVENYKEIGGGVQGCRGFHSSFRATQGGLSLNVDVSTTLLLKPGPVLDFLCANQDVKHPRFIDWTKLCTLVSLQRYTKALTSMQRASLVEVSRQKPRDRMTSLSNLKFGGMNSLLAIERSLSIPMVSQVPTLILGMDVSHGSPGRSDAPSIAAVVSSRYWPQISCYRASVHAQSPKVEMITNLFNFVSDTKDDGIFKELLDDFIDTSRRRPDHIVIFRDGVSESQFNQVLNIELQKIIQACKHFQESWDPKFTVIIAQKNHHTKFFQANAQENVPPGTVIDSRICHPKSNDFYMCAHAGMIGTSRPTHYHVLHDEIGFSADGLQELVHSLCYVYQRSTTAISVVAPICYAHLAATQVAQFIKFDELSESSPSHGGLTSVGTPQVQELPRLHEKVRNSMFFC 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1469 639 SUPERFAMILY PAZ domain 122 343 IPR036085 GO:0005515
Alju02g1469 639 SUPERFAMILY Ribonuclease H-like 342 598 IPR012337 -
Alju02g1469 639 SMART DUF1785_2 229 281 IPR014811 -
Alju02g1469 639 Pfam N-terminal domain of argonaute 164 219 IPR032474 -
Alju02g1469 639 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 106 294 - -
Alju02g1469 639 SMART Piwi_a_2 286 600 IPR003165 GO:0003676
Alju02g1469 639 Pfam Argonaute linker 1 domain 231 277 IPR014811 -
Alju02g1469 639 Pfam Piwi domain 343 600 IPR003165 GO:0003676
Alju02g1469 639 MobiDBLite consensus disorder prediction 161 175 - -
Alju02g1469 639 MobiDBLite consensus disorder prediction 156 175 - -
Alju02g1469 639 MobiDBLite consensus disorder prediction 68 102 - -
Alju02g1469 639 Gene3D - 360 639 IPR036397 GO:0003676
Alju02g1469 639 ProSiteProfiles Piwi domain profile. 345 600 IPR003165 GO:0003676
Alju02g1469 639 FunFam Protein argonaute 3 361 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1469 Alju-ChrAlju02 12584835 12592383 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1469 343 639 Eukaryotic Initiation Factors Gene Family AT5G43810 43.770 4.08e-78 266