Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1465 ATGGACATAGATCTAAGGTTACCTTCTGGTGACCACGATAAGGATGAAGAACAAAATTCTATTGCTGACATGTTGGAAGATGAAGAAAAATTTCATCCTGGAGATCTAGAAGGGCAGAATATGGTTGGTGCTAGTGTTGATGTACATGCTCTAGATAGTGGAGATTTGAATTCATCGACAGTGGATATGACAATATTTAAGGAAGATACAAATCTTGAGCCCCTTTCTGGCATGGAATTTGAGTCTCATGGGGAGGCTTATTCTTTCTACCAAGAATATGCAAGGTCAATGGGATTCAACACTGCAATACAAAATAGTCGCCGTTCAAAAACATCAAGAGAATTTATAGATGCAAAATTTGCTTGTTCCAGGTATGGAACAAAAAGAGAGCATGACAAATCATTCAATCGACCCCGTGCCAGACAGAACAAGCAAGATGCTGAAAATTCAACTGGTCGAAGATCTTGTTCAAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGAAGGCCTGATGGAAAATGGGTAATACATAGTTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCTCAAGCTGTCAGTGAGCAAACAAGAAAAATGTATGCTGCAATGGCTAGACAGTTCGCTGAATACAAAACTGTGGTTGGTCTCAAGAATGAGAAAAGTCCATTTGATAAAGGCCGGAATTTGGGCCTTGAGTTAGGGGATGCCAAGCTTCTACTTGATTTTATGGTGCAGATGCATAGTATGAATTCTAACTTCTTTTATGCAGTAGATATTGGTGAGGATCAACGTCTGAAAAATCTTTTATGGATTGACGCTAAAAGTAGGCATGACTATATGAACTTCTGTGATGTAGTTTCTTTTGACACTTTCTATGTTAGAAGCAAGTATAAGTTGCCTCTTGCGCTTTTTGTTGGAGTAAATCAGCACTATCAATTTATGCTGCTTGGGTGTGCCTTAATATCAGATGAAAGTGCTGCTACCTATTCTTGGCTAATGCGGACGTGGCTGAAAGCAGTAGGTGGCCAAGCTCCAAAAGTGATCATCATTGACCATGACAAGACATTAAAATCAGTTATTTTAGATGTTTTTCCTAATGCTCATCACTCCATGTGCTTATGGCAAGTATTAGGGAAGGTGTCTGAAAATCTGGCTCATGTAATTAAGCGACATGAGAATTTTATGGCAAAATTTGAAAAATGCATCTATAGGTCATGGACAAACGATGAGTTTGAGAAGAGGTGGTCGAAAATTGTTGATAGGTTTGAGCTCCGAGAGGATGAATGCATGCAGTCATTGTATGAAGATCGCAAGTTATGGGTGCCAACATTCATGAAGGATATTTTCTTAGGTGGTTTGTCCACCGTCCAGCGATCAGAAAGTGTGAATTCCTTCTTTGATAAATATGTTCATAAGAAGACCTCTGTGCAAGATTTTGTCAAGCAGTATGAAGCAATCTTGCAAGACAGGTATGAAGAGGAAGCAAAAGGTGATTCTGAGACATGGAATAAAGTGGCCACATTAAAAACTCCTTCACCATTGGAGAAGAGTGTTGCAGGGAGTTACACTCATGCATTGTTCAAGAAGATTCAAGTTGAGGTTATTGGTGCTGTTGCTTGTCATCCTAAAGCTGAAAGACAGGATGATGCAGGCATTAGTTACAAGGTTCATGATATGGAAAAGAATCAAGACTTCATTGTTGTGTGGAATGAAATTAAATCTGAAGTTTCATGCATTTGTCGGTTATTTGAATATAGAGGTTTTCTTTGTCGACATGCATTGATTGTTCTTCAATATTCTGGCCTTTCGGTAATACCACCCCAATATATCTTGAAACGGTGGACAAGAAATGCAAAAAGTGGACAAATAATGGGAGAAGAATCAGAACATATGCTAGCCAGGGTACAACGATACAATGATTTATGTCAGCGAGCAATGAAGTTGAGTGAAGAGGGATCTCTATCTCAAGACAGTTATAGTATTGCATTCCATGCGTTACGTGAAGCATACAAAAGTTGTGTGAGTGCTAACATTTCTAGCAAGAGTCCTGCCGAAGCTGTCATATCAGCTAGTCAGAGTCAGCTCTCTACTGAAGAAGACACCCTAAGTAGAAATATAGGCAAGACAAACAAAAAGAAGAATCCGACCAAGAAGAAAAAGCTGAACTCCGAGCCTGAAGTCATGACTGTTGGGGCACAAGATAACATGCAGCAAATGGACAAATTCAATGCAAGGACAGTAACCCTTGATGGTTATTATGGTTCTCAACAGAGTGTTCAGGGAATGTTGAACTTGATGGGACCAACACGCGATAATTATTATGGGAATCAACAGACAATTCAGGGGCTGGGACAACTAAGTTCCATACCAACAAGCCACGATGGTTACTATGGTGCTCATCAAAGCATGCCTGGTCTGGCACAGCTTGATTTTTTCCGGGCATCGACAAATTTCACTTATGGCATTCGGGATGATCAAAACGTAAGACCGACACAATTGCACGAGGACCCATCAAGACACGCATGA 2532 0.3997 MDIDLRLPSGDHDKDEEQNSIADMLEDEEKFHPGDLEGQNMVGASVDVHALDSGDLNSSTVDMTIFKEDTNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREHDKSFNRPRARQNKQDAENSTGRRSCSKTDCKASMHVKRRPDGKWVIHSFVKEHNHELLPAQAVSEQTRKMYAAMARQFAEYKTVVGLKNEKSPFDKGRNLGLELGDAKLLLDFMVQMHSMNSNFFYAVDIGEDQRLKNLLWIDAKSRHDYMNFCDVVSFDTFYVRSKYKLPLALFVGVNQHYQFMLLGCALISDESAATYSWLMRTWLKAVGGQAPKVIIIDHDKTLKSVILDVFPNAHHSMCLWQVLGKVSENLAHVIKRHENFMAKFEKCIYRSWTNDEFEKRWSKIVDRFELREDECMQSLYEDRKLWVPTFMKDIFLGGLSTVQRSESVNSFFDKYVHKKTSVQDFVKQYEAILQDRYEEEAKGDSETWNKVATLKTPSPLEKSVAGSYTHALFKKIQVEVIGAVACHPKAERQDDAGISYKVHDMEKNQDFIVVWNEIKSEVSCICRLFEYRGFLCRHALIVLQYSGLSVIPPQYILKRWTRNAKSGQIMGEESEHMLARVQRYNDLCQRAMKLSEEGSLSQDSYSIAFHALREAYKSCVSANISSKSPAEAVISASQSQLSTEEDTLSRNIGKTNKKKNPTKKKKLNSEPEVMTVGAQDNMQQMDKFNARTVTLDGYYGSQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPTSHDGYYGAHQSMPGLAQLDFFRASTNFTYGIRDDQNVRPTQLHEDPSRHA 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1465 843 MobiDBLite consensus disorder prediction 695 725 - -
Alju02g1465 843 SMART 26again6 578 605 IPR006564 GO:0008270
Alju02g1465 843 Pfam MULE transposase domain 287 378 IPR018289 -
Alju02g1465 843 ProSiteProfiles Zinc finger SWIM-type profile. 556 603 IPR007527 GO:0008270
Alju02g1465 843 Pfam SWIM zinc finger 572 601 IPR007527 GO:0008270
Alju02g1465 843 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 68 676 IPR031052 GO:0006355
Alju02g1465 843 MobiDBLite consensus disorder prediction 129 159 - -
Alju02g1465 843 Pfam FAR1 DNA-binding domain 88 190 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1465 Alju-ChrAlju02 12565639 12568889 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Alju02g1465 FAR1 1.1e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1465 02 12565639 12568889 Alju10g1724 10 27011948 27017315 CCT