Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1463 ATGTCTGCATTTTCAAATCTCCCTCTTCTCTTCTTCCTCTCTCTTCCATTATTACTCCTCCAAGCCCAACCTCCTCCTCCTCCTCCTCCTCCTTCGTCTCCTTCGGCTCTCTGCAAGTTCACATTGTACCCTAAACTATGTCGTTCCATGCTCTCCGTCATCTCCTCCACCCCCTCCGACCCCTACAATGCCGGCAAGTTCTCCGTCAAACAGAGCCTCAAGCAAGCCAACAAGCTCCTCAAGGTCTTCGACGACTTCCTCCGCAGCAATCGCCATTCTCAATCCTCACCGGAGGTTCGCGCCCTCGACGACTGCCGCGACCTCAGCCTCCTCAACCTCGACTACCTGGAAGCCGTCTCCGCCGACCTCCGATCCGCCGCAATGCCCTCCGCCGAGCTCACAGACAAGGTGGAGAGCTACCTGAGTGCGGTGGCGACCAACCAATACACGTGCTACGACGGGCTTGTGGCGGCGAACAGTAATATAGGGAAGGTGCTGGGGGTGGCGTTGAGGAATGTGACGGAGATGTATAGTGTGTCGTTACTATTGGTGAGTGAAGCTTTGAATCAGAATGTGAAGAACAAGTTCAAGACTCGCAAACATGGACTTCCTTCTCAGTCTTACAGAGTTAGACAGCCTCTTCAGAAGCTCATTCAGGTTCTTCATGAGAAGTACAGTTGCAAGGAGGCATCATCATCAAACTGCAGAAGCAGAAGGAGTGAGAGGATTATTGAGAGAGAGAGTGAAAGCAAAGGGATTCTATTAAACAACTATGCAATTGTGAGCCATTATGGGAATGATAACTTCAGCTCCATTGGAGAAGCCATTGCCGCTGCACCCACAAACCTGAAACCAGAAGAAGGCTACTTCCTTATCTATGTCAGAAAAGGATACTATGAAGAATATGTGATTGTTCCTAAACACAAGAAGAATATCTTGCTCATTGGTGATGGTATCAACCAAACTATCATCACTGGCAATCACAGTGTCATTGATGGTTGGACCACCTTCAATTCTTCCACCTTTGCTGTTTCTGGAGAAAGGTTCATAGCAGTGGATATCACATTCAGGAACACAGCAGGTCCAGAGAAGCACCAGGCAGTAGCAGTAAGGAACAACGCTGATCTCTCGACCTTTTATCGATGCAGCTTTGAAGGATACCAAGACACACTCTATGCCCACTCCCTGAGGCAGTTCTACAGAGAATGTGAAATTTATGGCACAGTAGACTTCATATTTGGCAATGCAGCTGTTGTATTCCAAAACTGCAAGATCTATGCCAGGAAGCCACTTCCATTCCAGAAGAATGCCATCACAGCACAAGGCAGAACCGACCCGAATCAGAACACCGGAATCTCAATCCAGAATTGCACCATTGAAGCAACACAAGATTTGGCTTCAGAATTGAACTCCACTACTAACTCTTCTGTCTTGACCTACTTGGGAAGGCCATGGAAGTTATATTCTAGAACTGTGTTCATGGAGTCTTATATTGGGGATGTGATTGAGCCTTCTGGTTGGTTGGAGTGGAATGGGACTGTAGGGTTGGACACTTTGTTTTTTGGTGAGTTCAATAATTATGGACCTAGGGCTAGTATTAGCAATAGGGTTCAATGGCCTGGTTTTAACCTTCTGAATGCTACTCAGGCTTTGAACTTTACTGTCCTCAATTTTACACTGGGAGATACATGGCTTCCTGACACAGATATACCATACTCTGCAGGATTACTAGGAAATTAG 1740 0.4713 MSAFSNLPLLFFLSLPLLLLQAQPPPPPPPPSSPSALCKFTLYPKLCRSMLSVISSTPSDPYNAGKFSVKQSLKQANKLLKVFDDFLRSNRHSQSSPEVRALDDCRDLSLLNLDYLEAVSADLRSAAMPSAELTDKVESYLSAVATNQYTCYDGLVAANSNIGKVLGVALRNVTEMYSVSLLLVSEALNQNVKNKFKTRKHGLPSQSYRVRQPLQKLIQVLHEKYSCKEASSSNCRSRRSERIIERESESKGILLNNYAIVSHYGNDNFSSIGEAIAAAPTNLKPEEGYFLIYVRKGYYEEYVIVPKHKKNILLIGDGINQTIITGNHSVIDGWTTFNSSTFAVSGERFIAVDITFRNTAGPEKHQAVAVRNNADLSTFYRCSFEGYQDTLYAHSLRQFYRECEIYGTVDFIFGNAAVVFQNCKIYARKPLPFQKNAITAQGRTDPNQNTGISIQNCTIEATQDLASELNSTTNSSVLTYLGRPWKLYSRTVFMESYIGDVIEPSGWLEWNGTVGLDTLFFGEFNNYGPRASISNRVQWPGFNLLNATQALNFTVLNFTLGDTWLPDTDIPYSAGLLGN 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1463 579 Pfam Pectinesterase 259 561 IPR000070 GO:0030599|GO:0042545
Alju02g1463 579 NCBIfam pectinesterase inhibitor domain 9 185 IPR006501 GO:0004857
Alju02g1463 579 Gene3D - 254 576 IPR012334 -
Alju02g1463 579 PANTHER PECTINESTERASE 22 566 - -
Alju02g1463 579 Pfam Plant invertase/pectin methylesterase inhibitor 35 181 IPR006501 GO:0004857
Alju02g1463 579 CDD PMEI-like_3 38 186 - -
Alju02g1463 579 FunFam Pectinesterase 254 576 - -
Alju02g1463 579 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
Alju02g1463 579 SMART PMEI_2 29 183 IPR006501 GO:0004857
Alju02g1463 579 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 185 IPR035513 -
Alju02g1463 579 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 187 IPR035513 -
Alju02g1463 579 SUPERFAMILY Pectin lyase-like 256 575 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1463 Alju-ChrAlju02 12535028 12541174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1463 38 577 Carbohydrate Esterase AT3G10720 58.165 0.0 664