Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1462 ATGTCTCCCTACGACAAGCTTGACGAATGCGAGCAAGAAAAGCTCGTAGCTCGCCGGAAAACCCGGAGGCGAATCGCCATCATGAGCTTGTCAACTATTGTCCTGGTCGGCATTGTTGTGGTGGCTGTCTTAGGAACAAGTCTTGCTCACAACAATGACAAGGACAGCAGCAGCAGTAGCAGCAACAATGTCGATGTTTTGGCTTCGGTGAAAGCTGTGTGTGATGTAACATTGTTTAAGGATGGTTGTTATGCCAGCCTCGGACGTGTGGTTCAACCAGGACAAGTGATTAAGCCTGAGGACTTGTTCAGGCTGTCTCTTCAAGTTGCACTGGATGAAGTTTCTGGTGCTGTTAATAAGTATTTTTCTGGTGAAAAGAGAGGTTTTGAGGATTTGATTGGTAGTGATAATAGGACCATGGAAGCTTTCAGCAATTGCAAGGAGCTTTTGGATCTTGCTGTTGATCATCTGAATATGTCATTGTCTTCTGGGTGGAATTCTTCTTCTGTTCTTGAGCTTTTTGAAGATCTTCAAACATGGTTGAGTGCTTCAAGAACATACCAACAAACATGCATAGATGGCTTAGAGGAAACAAAAGAATCACTAAACAACAGAGTTAGAAGCTACCTGAAGAACTCTACAGAGTTTAGTAGCAACAGCCTCGCCATTATCACTTGGATTCAGCAGGCTACAAGCACACTAAACTTGAGACGACGCTTATTATTAACCCTACCAAATCACAATGAAGCACCGGCATGGCTTCATCAGAAAGACAGAAAGCTGCTTGCATCAGACAAGGACTTGAAGCATAAACCAGACATAGTTGTGGCAAAAGATGGCTCTGGAAAGTACAGAACAATCTCTGAAGCACTCAAGCATGTCCCTGAAAAGAGCAAGAAGAGAACTGTGATCTATGTGAAGAAAGGAATTTACTATGAGAATGTAAGAGTGGAGAAGAATAAATGGAATGTCGTGATGATTGGTGATGGAATGAACACAACAATTGTGTCTGGTCGTCTCAACTTTGTCGATGGCACGCCCACTTTCTCTTCTGCAACATTTGCTGTTTTTGGGAAGAACTTTATGGCGAAGGACATGGGATTTCGCAACACGGCCGGGCCACAGAAGCACCAAGCAGTGGCACTGATGGCAAGTGCAGATCAGGCTGTGTTCTACAGATGCCTCATTGATGCATTTCAGGACACTCTCTATGCTCATTCGCTGCGCCAGTTCTACAGAGAATGTGAAATTTATGGTACCGTTGATTTCATCTTTGGCAACTCTGCAGTTGTCATCCAAAACTCCAACATCTTCCCAAAGGTACCTATGTGGGGCCAGCAGAACACAATCACAGCACAAGGGAAGATAGACCCTAATATGAACACAGGGATTTCAATTCAGAATTGCAGCATCTTACCATTTGGGAACTTGAGTTCTGTGCAAACATATCTTGGGAGGCCATGGAAGAACTACTCAACCACTGTGTTCATACAATCTTCAATGAGAGACTTAATTAATCCAAGTGGCTGGTTGCCATGGGTTGGAAACTCAGCACCAGACACCATTTTCTATGCTGAGTTTCAGAACTTTGGACCTGGTGCTTCGACAAAAAATAGGGTCAAATGGAAGGGTTTAAGAACAATTTCTGCTAAACAAGCAAGTAGATTCACTGTCAAGGCCTTTCTCCAAGGAGACCGATGGATTCCAGTTACAGGCACCCCTTACAAGTCTTCTCTGTGA 1740 0.4391 MSPYDKLDECEQEKLVARRKTRRRIAIMSLSTIVLVGIVVVAVLGTSLAHNNDKDSSSSSSNNVDVLASVKAVCDVTLFKDGCYASLGRVVQPGQVIKPEDLFRLSLQVALDEVSGAVNKYFSGEKRGFEDLIGSDNRTMEAFSNCKELLDLAVDHLNMSLSSGWNSSSVLELFEDLQTWLSASRTYQQTCIDGLEETKESLNNRVRSYLKNSTEFSSNSLAIITWIQQATSTLNLRRRLLLTLPNHNEAPAWLHQKDRKLLASDKDLKHKPDIVVAKDGSGKYRTISEALKHVPEKSKKRTVIYVKKGIYYENVRVEKNKWNVVMIGDGMNTTIVSGRLNFVDGTPTFSSATFAVFGKNFMAKDMGFRNTAGPQKHQAVALMASADQAVFYRCLIDAFQDTLYAHSLRQFYRECEIYGTVDFIFGNSAVVIQNSNIFPKVPMWGQQNTITAQGKIDPNMNTGISIQNCSILPFGNLSSVQTYLGRPWKNYSTTVFIQSSMRDLINPSGWLPWVGNSAPDTIFYAEFQNFGPGASTKNRVKWKGLRTISAKQASRFTVKAFLQGDRWIPVTGTPYKSSL 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1462 579 Gene3D Invertase/pectin methylesterase inhibitor family protein 68 229 IPR035513 -
Alju02g1462 579 NCBIfam pectinesterase inhibitor domain 67 227 IPR006501 GO:0004857
Alju02g1462 579 SMART PMEI_2 65 223 IPR006501 GO:0004857
Alju02g1462 579 FunFam Pectinesterase 66 228 - -
Alju02g1462 579 FunFam Pectinesterase 267 579 - -
Alju02g1462 579 Gene3D - 267 579 IPR012334 -
Alju02g1462 579 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 70 227 IPR035513 -
Alju02g1462 579 PANTHER PECTINESTERASE 36 569 - -
Alju02g1462 579 Coils Coil 192 212 - -
Alju02g1462 579 Pfam Pectinesterase 273 565 IPR000070 GO:0030599|GO:0042545
Alju02g1462 579 CDD PMEI-like_3 72 227 - -
Alju02g1462 579 ProSitePatterns Pectinesterase signature 2. 417 426 IPR033131 -
Alju02g1462 579 Pfam Plant invertase/pectin methylesterase inhibitor 69 223 IPR006501 GO:0004857
Alju02g1462 579 SUPERFAMILY Pectin lyase-like 271 576 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1462 Alju-ChrAlju02 12531936 12534462 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1462 2 579 Carbohydrate Esterase AT3G10710 56.454 0.0 660