Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1435 ATGGGTTTAAAACATGCCTTTGAAGTATTCAAAACAAGGGATAGGGGATGGGGTCTGCGATCATGGGATCCTATTCGTGCTGGTTCTTTTATTTGTGAATATGCTGAAGAAGTTATTGACAAAGGAAACTTAAATCAAAATGAGGAGTTGGCAATGAAAGATGAGTATGCTTTTAATACTAGCCATATTTATCCACCTTTTAAGTGGAATCATACACCTCAGTTATTGGAAGAAGTGAGTTCAAATGACTCTAGTAAGGATTATGATATTCCATCTCCTCTAGTTATAAGTGCTAAAGAGTATGGAAAAGATAGTTAG 318 0.3553 MGLKHAFEVFKTRDRGWGLRSWDPIRAGSFICEYAEEVIDKGNLNQNEELAMKDEYAFNTSHIYPPFKWNHTPQLLEEVSSNDSSKDYDIPSPLVISAKEYGKDS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1435 105 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 2 102 - -
Alju02g1435 105 SUPERFAMILY SET domain 2 102 IPR046341 -
Alju02g1435 105 Gene3D SET domain 1 105 IPR046341 -
Alju02g1435 105 Pfam SET domain 16 60 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1435 Alju-ChrAlju02 12155202 12155884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1435 2 102 Su(var)3-9 homologs AT1G73100 57.426 5.48e-36 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Alju02g1435 SET 2.5e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1435 02 12155202 12155884 Alju10g1732 10 27737382 27739328 CCT