Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1431 ATGGTGCATGAAATTGACGATGGAGAGCTCCCCAGTGAGCAGAATGGGCCACAGTTGAATGATGAGAGCAATGGAGGAAGTGCCAGTGGAGTTATTCTGAAGAAAGGTCCATGGACATCTGCTGAAGATGCTGTTTTGGTGGACTATGTTAAGAAGCATGGGGAAGGGAACTGGAATGCTGTTCAGAAGCACTCAGGCCTTTCCCGATGTGGCAAAAGCTGCCGACTGAGGTGGGCAAATCACCTAAGGCCAAATTTAAAGAAAGGAGCTTTTACTGCAGAAGAGGAGAGGTTGATTGCTGAACTCCATGCCAAGATAGGAAACAAATGGGCTCGCATGGCTGCACATCTGCCTGGTCGTACTGATAATGAGATAAAGAACTACTGGAATACTCGTATAAAGAGGCGTCAGCGGGCTGGCTTGCCTCTATATCCTCCTGAAGTGTGTTTACAAGAATCAAAGGAGAGTCAACAAGGCCGAAGCACTGCTGGACAAATTGGAGATAGAGAGCAGAATGATTTTCTGCTGGAAAACGGTTATCAGAAACATGATATTCTATTTGACAGTCTGAATGCAAATCAGGGAGGCTTTCCTTGTGTGCCGGATATTCCTGATATTTCTGCCAATAACATTCTGCTGAAAGGTCTCAGTTCTTCCCAGCATTGTAATTTTTTGCCATCAACATTATCTTACCATAAGCGCTTTCATGATTCAACAATGCCATTTCTTAGTTCATCTGAGGTGACCAGAAATGGGTTTTATCCTTTACACAATATTCAGGATTATACTTTTGATAAGATTGGACGATCATTTGGATACTATTCACCCCTTAATCCTGGTCCCTCCTCACAGAACTCACTGTGTTACAGCCATTCACTTTCAAATGGCAATTCCTCTACTTCTAAGCCATCTTTTGAGGCTGTGAAGCTGGAGCTCCCTTCACTCCAATTTCCAGAAACTGATTTAGGTAGCTGGGGTACGCCTCCTCCACCTCCTTTGCTAGAATCAGTTGATGTTCTCACAGGTACTCCCCTGCCAACTAGTTTGCTGGAGTCAGATTCTTCTTCACCCTATAACAGTGGCCTCCTGGATGCTTTACTTCATCAGTCCAAGAACCTGAGCAGTTCAAATAACCATTGTTCTGACAAGAGTTCAAATTCATCTACTGCTACCCCTGGTGATAGAGCTGACAGCTCCACTTTGTACGTGTATGAGCCAGAATGTGAAGATTATGCAGACTGTATTTCTCCATTTGGTGCAACTTCGATGTTGAATGAATGTCTTGCTGTTAGTGCCAACAGAAACTCATTTGATGAACTGCAACCCGCACAGACCTTAAATGAAAACACTCTGAAAGCCGAACCTGCTTACCAGGCTTTGACCCCCAACAGTGATGATCAAGGCATGTCGATGTTGGATATGCCCCGACCAGATGTTTTGCTTGATTCAGATTGGTATGAGCTAGGCCCTGCATTTACCAAGAATCAGGTTGACATGAACAATTCCAGAGAAACCCTCGTCGGTGGTGATGATTTAGCCACTGACTTCAAGTACATATCTGAGGAAATCTCACCATCTAGTCAAATATGGGGTTTGGATTCTTGCACTTGGAATAACATGCCTGCTGTCTGCCAAATGTCTGATCTTCCATAA 1653 0.4422 MVHEIDDGELPSEQNGPQLNDESNGGSASGVILKKGPWTSAEDAVLVDYVKKHGEGNWNAVQKHSGLSRCGKSCRLRWANHLRPNLKKGAFTAEEERLIAELHAKIGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCLQESKESQQGRSTAGQIGDREQNDFLLENGYQKHDILFDSLNANQGGFPCVPDIPDISANNILLKGLSSSQHCNFLPSTLSYHKRFHDSTMPFLSSSEVTRNGFYPLHNIQDYTFDKIGRSFGYYSPLNPGPSSQNSLCYSHSLSNGNSSTSKPSFEAVKLELPSLQFPETDLGSWGTPPPPPLLESVDVLTGTPLPTSLLESDSSSPYNSGLLDALLHQSKNLSSSNNHCSDKSSNSSTATPGDRADSSTLYVYEPECEDYADCISPFGATSMLNECLAVSANRNSFDELQPAQTLNENTLKAEPAYQALTPNSDDQGMSMLDMPRPDVLLDSDWYELGPAFTKNQVDMNNSRETLVGGDDLATDFKYISEEISPSSQIWGLDSCTWNNMPAVCQMSDLP 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1431 550 Pfam Myb-like DNA-binding domain 35 82 IPR001005 -
Alju02g1431 550 Pfam Myb-like DNA-binding domain 88 131 IPR001005 -
Alju02g1431 550 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 82 IPR017930 -
Alju02g1431 550 SMART sant 34 84 IPR001005 -
Alju02g1431 550 SMART sant 87 135 IPR001005 -
Alju02g1431 550 MobiDBLite consensus disorder prediction 13 27 - -
Alju02g1431 550 ProSiteProfiles Myb-like domain profile. 33 82 IPR001005 -
Alju02g1431 550 MobiDBLite consensus disorder prediction 374 397 - -
Alju02g1431 550 Gene3D - 34 87 - -
Alju02g1431 550 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 21 504 - -
Alju02g1431 550 FunFam MYB-related transcription factor 34 87 - -
Alju02g1431 550 FunFam Transcription factor GAMYB 90 136 - -
Alju02g1431 550 MobiDBLite consensus disorder prediction 374 396 - -
Alju02g1431 550 MobiDBLite consensus disorder prediction 319 339 - -
Alju02g1431 550 MobiDBLite consensus disorder prediction 1 33 - -
Alju02g1431 550 CDD SANT 37 82 IPR001005 -
Alju02g1431 550 Gene3D - 90 136 - -
Alju02g1431 550 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Alju02g1431 550 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 137 IPR017930 -
Alju02g1431 550 SUPERFAMILY Homeodomain-like 34 129 IPR009057 -
Alju02g1431 550 CDD SANT 90 131 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1431 Alju-ChrAlju02 12125755 12128681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1431 6 543 MYB Transcription Factor Family AT3G11440 40.575 2.21e-115 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju02g1431 Myb_DNA-binding 2.3e-14 CL0123