Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1430 ATGAATCAGACAAGCATACCAGAACAACAAAGCAGCAGCAAACGCGAACACGAACACGAAGGATGTGATGAGGAGACAAGAGAGGAATTCAAGAACTATATTTGTGGAGGGTGCGAGAACAAGAGGCCAAGATCAATAGGAAGAAATAATAAGAGGGAATTCACTTATGCAGAATTGTATGCAGCAACAGGTGGATTTTCTATAAAGAATTTTGTATCAGAAGGAGGTTGTGGCAAAGTGTACAAAGGGAAGCTTTATGATGGGATGAAGATAGCTGTGAAGCTGCAACACAACACAAATAAAAGCAGCAACAAGGAATTCAAGACAGAGGTTGAAGCACTGAGGAGAGTGAGGCATGAGAATGTTGTTGTCATGTTGGGCTCTTGCTCTGAAGGAAATCATAGGCTTCTCGTCTATGAATTTGTCTGCAATGGTTCTCTCAACCAGCATTTACACCAACACTGTAGGATACCTCTGAGTTGGGAGAACAGAATAAAAGTGGCAATGGGAGTAGCAAGAGGATTGCTATATCTGCATGACAACAACATCATTCACAGAGATATGACCCCTAACAACATCCTTCTTACTCATGACTTTGAAACCTTGCTGGGAGATTTTGGGCTGGCAATAACAAGTGAAGAGAAAGAGACATCATCAGAGGAATATGTAGGAGATGAGGATTATGTGGCGCCAGAATATGCTGAGCATGGAAAATTATCAACAAAAACAGATGTTTACTCTTTTGGAGTGGTTCTCTTACAGCTTATTACTGGCATCAGAACTACTGATAGAAGGAGACTTGGAGAAAGACGAAGCCTTGTTGATTGGGCAAGGCCATTGTTGAGAGAAAAGGAATGTGGGACAGTGATAGATGAGAGGATATTGGAAGATCATGATTGCCATCAGTTGTATTGGTTGAGTCGTCTTGCTGAGTCTTGTCTCTCAAGAAATCCTCACAAGCGTTTGACTATGGCCAAGGTGGTGGAAGGCTTGAGTCATATTGCAAAAGGATGCACATGCAATGATAAGATAAAGAAGTGTGGTTCATCCTCCCACACAGATCCATCACCCCTCCTCCTCTCTGCCTCTCCTATAAACTCAAGGTTGAATCAATCCCACCCTTTCCAAAGCCTCCAACAGGTTAATAATATAAGATAA 1158 0.4206 MNQTSIPEQQSSSKREHEHEGCDEETREEFKNYICGGCENKRPRSIGRNNKREFTYAELYAATGGFSIKNFVSEGGCGKVYKGKLYDGMKIAVKLQHNTNKSSNKEFKTEVEALRRVRHENVVVMLGSCSEGNHRLLVYEFVCNGSLNQHLHQHCRIPLSWENRIKVAMGVARGLLYLHDNNIIHRDMTPNNILLTHDFETLLGDFGLAITSEEKETSSEEYVGDEDYVAPEYAEHGKLSTKTDVYSFGVVLLQLITGIRTTDRRRLGERRSLVDWARPLLREKECGTVIDERILEDHDCHQLYWLSRLAESCLSRNPHKRLTMAKVVEGLSHIAKGCTCNDKIKKCGSSSHTDPSPLLLSASPINSRLNQSHPFQSLQQVNNIR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1430 385 FunFam Proline-rich receptor-like protein kinase PERK8 25 141 - -
Alju02g1430 385 MobiDBLite consensus disorder prediction 1 23 - -
Alju02g1430 385 SUPERFAMILY Protein kinase-like (PK-like) 51 329 IPR011009 -
Alju02g1430 385 Gene3D Transferase(Phosphotransferase) domain 1 142 351 - -
Alju02g1430 385 Gene3D Phosphorylase Kinase; domain 1 36 141 - -
Alju02g1430 385 Pfam Protein tyrosine and serine/threonine kinase 69 330 IPR001245 GO:0004672|GO:0006468
Alju02g1430 385 ProSiteProfiles Protein kinase domain profile. 66 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1430 385 ProSitePatterns Tyrosine protein kinases specific active-site signature. 183 195 IPR008266 GO:0004672|GO:0006468
Alju02g1430 385 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 142 346 - -
Alju02g1430 385 PANTHER OS01G0253100 PROTEIN 18 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1430 Alju-ChrAlju02 12120609 12123652 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1430 49 345 Trihelix Transcription Factor Family AT5G38560 41.042 2.04e-72 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Alju02g1430 PK_Tyr_Ser-Thr 6.1e-47 CL0016