Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1429 ATGTCCCCAGAACCTCAGAGAGCTGTGGTGATCCAGGATGCTTCAAGAGATGTTTGTAGAAGTGCAATAAAAAGGGTTCTGAAACAGCTATCTCTAAAGCCTGGAGATGAGCTCACAATTCTTGCTATATTTGGGAACATGATCGTCAAGATGGATTCAACATCATTTATTGCAACAGATCAGAAAATTCTTCAAGAGGAACTTGGCAAGATAAAGGAAGAATATCGCAAGAGACCACGAGTCATGAAACTTTCTGACTATTGTAAAGCAAAAAATATAGAAGTGCTTGCAAACCCTTCTCCAGAGGTTACTTGTAATGCTGTCAATATATATAGGGCAACATACTTAGTACTCAACAGACATATGAACAAAGATAAGAGGCACTTCATGGACAATCTCGCTTGTGGTATTTATAGGATAAGGAATCGCTATAGAATTCAAATGATAAGAAAGCCAAAACTAACAGAGAACAGCAAATCATTTGCTGAAAGATCAGATTATGTACAAACTATGGAAGTGATACCAGGAAGCTCAGAGGAACAATTTTCTCTGACTCCAAGTGAAAGGTTTGGCATAGCTTGTTATGAAATCATTGAACTTCATCCAAATCTTCATACTTTATGGGTGTATAATGAAGCATCAATTATGATTTTTGACAATCCTCAAAATTCCAAAGGCCTGACTTCCAGTGATTCTCTAAAATACCAAGAGGAAGAAAATTTTCAAAAGACCAAGCACCAAACAGAAGTACCTCGATTTGAGATGAAAGAAGAGCTCACAAACCCACTTTGTTCAGTCTGCAAGAACAAAAGACCAAAAGCTGGATGGATAAGAGACTTCAGTTGCTCTGAGCTTTACACAGCAACCAAGGGATTTTCCCAGAAGAATTTTCTATCAGAAGGTGGGTTTGGATTGGTATACAAAGGGCAGCTAGATGGAATGGAAATTGCTGTTAAGCAACAAAAATCTGCTAGCCTTCAAGGGGAGAAGGAGTTTAAGTCAGAAGTCAATCTATTAAGCAAAGCAAGACATGAGAACGTAATCATGCTGTTGGGGTCATGCTCTGAAGGAAACAATAGGCTTCTTGTTTATGAATACGTATGCAACGGTTCGCTGGATCAACACCTATCTCAACATTCTCGAACTCCACTTAGATGGGAAGATAGGATTAAAGTAGCTATTGGATCTGCTAAAGGCTTATTATACTTGCATGAGAATAACATCATACACAGAGATATGAGAACAAACAATATCCTCTTAACACATGATCATCAACCACTGCTGGGAGACTTTGGTTTGGCAAGAAGTCAACATGAAAACTCAATCCATTCAACAGAGGTTGTTGGGAGTTTTGGATATTTGGCTCCAGAATATGCAGAATATGGCAAAGTGTCGAATAAAATAGATGTTTATTCTTTTGGGGTAGTCCTATTGCAGCTAATAACTGGAATGAGGATTACAGACCAAAGACTTGAAGGCAAAAGTCTTGTCGGATGGGCAAGACCACTATTGAGAGAGAGGAATTATCCAGATCTAATTGATGAAAGGATCATGAATTCTCATGATTACCATCAACTATTTTGGATGGTTCGAATTGCAGAGAAATGTCTAAGCAGGGACCCTCACAAGAGACTAAATATGGGTGAGGTGGTTGTTGCTTTAACTCACATAGCGGAGGGCGAGATATGTGGGAACATAAACACAGATTTCTTCCCTGTGAGATCAGATTCATTTTACAGCGCATCAGACGAAAGCGAAGAATCATCAGAAGATGAAATAATGAATGATGCAGAAGATGAGTCTGAAAGTGGCGGTACAGATTCCAGTAGCAACATGAGCCAGATGGATTTGGGACTCCCTAACCCTCCATCCCCTCCTCTAATAACGGATGCCACTTCATTTAGCAGGTTGATTACAGTTAAAGAGCATGACCAGCCAACTATGAACACCCAAGTGGATGGTGTAATTCCAATGGATATAATCGCAGAAATGGAGGCGTAG 2001 0.3953 MSPEPQRAVVIQDASRDVCRSAIKRVLKQLSLKPGDELTILAIFGNMIVKMDSTSFIATDQKILQEELGKIKEEYRKRPRVMKLSDYCKAKNIEVLANPSPEVTCNAVNIYRATYLVLNRHMNKDKRHFMDNLACGIYRIRNRYRIQMIRKPKLTENSKSFAERSDYVQTMEVIPGSSEEQFSLTPSERFGIACYEIIELHPNLHTLWVYNEASIMIFDNPQNSKGLTSSDSLKYQEEENFQKTKHQTEVPRFEMKEELTNPLCSVCKNKRPKAGWIRDFSCSELYTATKGFSQKNFLSEGGFGLVYKGQLDGMEIAVKQQKSASLQGEKEFKSEVNLLSKARHENVIMLLGSCSEGNNRLLVYEYVCNGSLDQHLSQHSRTPLRWEDRIKVAIGSAKGLLYLHENNIIHRDMRTNNILLTHDHQPLLGDFGLARSQHENSIHSTEVVGSFGYLAPEYAEYGKVSNKIDVYSFGVVLLQLITGMRITDQRLEGKSLVGWARPLLRERNYPDLIDERIMNSHDYHQLFWMVRIAEKCLSRDPHKRLNMGEVVVALTHIAEGEICGNINTDFFPVRSDSFYSASDESEESSEDEIMNDAEDESESGGTDSSSNMSQMDLGLPNPPSPPLITDATSFSRLITVKEHDQPTMNTQVDGVIPMDIIAEMEA 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1429 666 MobiDBLite consensus disorder prediction 579 632 - -
Alju02g1429 666 FunFam Proline-rich receptor-like protein kinase PERK8 254 366 - -
Alju02g1429 666 ProSiteProfiles Protein kinase domain profile. 292 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1429 666 Pfam Protein tyrosine and serine/threonine kinase 295 552 IPR001245 GO:0004672|GO:0006468
Alju02g1429 666 MobiDBLite consensus disorder prediction 604 618 - -
Alju02g1429 666 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 367 569 - -
Alju02g1429 666 MobiDBLite consensus disorder prediction 583 603 - -
Alju02g1429 666 PANTHER OS01G0750732 PROTEIN 234 588 - -
Alju02g1429 666 SUPERFAMILY Protein kinase-like (PK-like) 276 562 IPR011009 -
Alju02g1429 666 Gene3D Transferase(Phosphotransferase) domain 1 367 567 - -
Alju02g1429 666 Gene3D Phosphorylase Kinase; domain 1 264 366 - -
Alju02g1429 666 ProSitePatterns Tyrosine protein kinases specific active-site signature. 408 420 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1429 Alju-ChrAlju02 12113242 12118609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1429 280 580 Trihelix Transcription Factor Family AT5G38560 45.860 3.09e-77 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Alju02g1429 PK_Tyr_Ser-Thr 8.8e-47 CL0016