Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1418 ATGAGGAAGAAACTGGATACTCGTTTCCCTGCTGATTTCTCTGATTTGGTAGCTTCCCCTGACATCAGGGCTCGGATTAAAAAGATAATGCAAGCAGATGAAGATGTTGGGAAGATAGCACTAGCAGTGCCCGTTTTAGTTTCTAAAGCTTTAGAGCTGTTTTTGCAAGACCTTTGTGATCGTACATATGAAATAACTCTTCAGAGAGGAGCAAAGACGATGAGTGCATTGCATCTAAAACATTGTGTACAAAGCTATAATGTCTTTGATTTTCTGAAGGATGTCGTCAGCAGGGTTCCTGACTATGGCCATGGGCATGGGCATGGACATAACCATTCTGAGACTGGTGCTGATGATCGGGTCATTCCAAGAAGAAGGAAAGCAGCAAATGACAATCACCATGATAGCGATGATGACTCCAAGAGAAGCAAGATGCATGAGATTAGTCATACTGGCAGTAGTGGTAGGGGAAGGGGAAGAGGCAGAGGCCGAGGGAGAGGCCGAGGCCGAGGGGCTCAAAATGTTGAACGTGATAGAGAGACTCATCATCAAGAACTTGAAACTGAACCTTGCACTTCTGCTCTGAACAGCAGCAAACATAATCCTGATACAGACGTGGCAATTGATAATGGTTCAGAGCCGAAGGAGTTACCAAAAGAGAGTAATGCAATTCCCGATGAAGGCGCTCAATCTGTCCGTAACATTGATCTGAATGCCAACTTGAATGAAAACGAAGACAAAAATGCTAGCACGGGCATGGCGGTAACTGATGCCCCTTCTATACCTGATCCTCCAAAACCTGAGACCAAACATGAAGAAATCCCTGGCTGGTCTCTATCTGATGTGGACAAGATGGTCATTGACTCTATGCAGCTTGCACACCTTGGTAGACAGATAGAAGAGGATGAGGAAGATTATGATGAAGAAGGGTGA 933 0.4502 MRKKLDTRFPADFSDLVASPDIRARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMSALHLKHCVQSYNVFDFLKDVVSRVPDYGHGHGHGHNHSETGADDRVIPRRRKAANDNHHDSDDDSKRSKMHEISHTGSSGRGRGRGRGRGRGRGRGAQNVERDRETHHQELETEPCTSALNSSKHNPDTDVAIDNGSEPKELPKESNAIPDEGAQSVRNIDLNANLNENEDKNASTGMAVTDAPSIPDPPKPETKHEEIPGWSLSDVDKMVIDSMQLAHLGRQIEEDEEDYDEEG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1418 310 Gene3D Histone, subunit A 23 98 IPR009072 GO:0046982
Alju02g1418 310 MobiDBLite consensus disorder prediction 233 255 - -
Alju02g1418 310 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 24 141 - -
Alju02g1418 310 MobiDBLite consensus disorder prediction 102 279 - -
Alju02g1418 310 FunFam dr1-associated corepressor homolog 1 98 - -
Alju02g1418 310 SUPERFAMILY Histone-fold 30 99 IPR009072 GO:0046982
Alju02g1418 310 MobiDBLite consensus disorder prediction 264 278 - -
Alju02g1418 310 MobiDBLite consensus disorder prediction 169 187 - -
Alju02g1418 310 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 83 IPR003958 -
Alju02g1418 310 MobiDBLite consensus disorder prediction 188 205 - -
Alju02g1418 310 MobiDBLite consensus disorder prediction 102 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1418 Alju-ChrAlju02 12004668 12008433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1418 1 299 CCAAT-HAP5 Transcription Factor Family AT3G12480 48.553 4.72e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Alju02g1418 CBFD_NFYB_HMF 6.9e-17 CL0012