Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1410 ATGTCCCCCGCCTACCCGCCAGTCTCCGCCACCAGCACAGGCCTCGGCTACGGCATCGCCATCGCGGTCAGCATCCTCGTCCTCATTTCCAGCATCATGCTCGCCTCTTATGCTTGTGTCCGGATAAAGGCCAACAGCCGCGGCCTTAACCGCCGTATCAGTAGTAGTAGGAGTAGTAATAACTCCGACGAGCCGGTGGTGGTTGTTTTGGGCCTGGATAAGCCCACTATTGAAGCCTACCCGAAGATTGTGTTAGGGGAGAGTCGGCGATTGCCCAGGCCCAATGGAGGCCCATGCGCCATTTGCTTGGGAGAGTATGTGAAGAATGATACTGTGCGCTGCGTTCCAGAGTGCAACCACTGTTTCCATGTGGAATGCTTGGATGAATGGCTTCGTCTGAGTGCCACGTGTCCTATATGTCGGAACTCTCCTGCTCCGTCGCCGCGGCCTACGCCGGTTGCCACTCCTCTGTCAGAATTGGTTCCACTTGCTTCTTACGCGAGGTGA 507 0.5661 MSPAYPPVSATSTGLGYGIAIAVSILVLISSIMLASYACVRIKANSRGLNRRISSSRSSNNSDEPVVVVLGLDKPTIEAYPKIVLGESRRLPRPNGGPCAICLGEYVKNDTVRCVPECNHCFHVECLDEWLRLSATCPICRNSPAPSPRPTPVATPLSELVPLASYAR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1410 168 SUPERFAMILY RING/U-box 98 147 - -
Alju02g1410 168 Pfam Ring finger domain 99 141 IPR001841 -
Alju02g1410 168 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Alju02g1410 168 PANTHER RING-H2 FINGER PROTEIN ATL67 10 167 IPR044289 GO:0016567|GO:0016740
Alju02g1410 168 CDD RING-H2_EL5-like 99 141 - -
Alju02g1410 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 146 IPR013083 -
Alju02g1410 168 SMART ring_2 99 140 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1410 Alju-ChrAlju02 11932513 11933019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1410 1 168 C3H Transcription Factor Family AT5G07040 61.905 4.41e-65 194