Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1403 ATGCAACAAACATTTTCTCTGATGTTTTTCGCGAAGCCGTCTTATTCTTCTCCCACTCCTCAAGCGGCTATCAGTTCCCTGGTTCTCTCTTGCCCTCCCCTCTCTGTTTCAATCATGGCTACTGCTAGAACTGTCAAGGACGTTTTGCCTCACGAGTTCGTGAAGGCTTATTCTGCTCATCTCAAGCGATCTGGCAAGATGGAGCTTCCCGAGTGGATGGATATTGTGAAGACTGCAAGATTCAAGGAGCTGGCTCCATATGATCCTGATTGGTACTATGTCAGGGCCGCTTCCATGGCTAGGAAGATCTACTTGAGAGGGGGTCTTGGTGTTGGTTCTTTCCAGCGGATTTATGGTGGGAGCAAGAGGAATGGTAGCCGACCTCCTCATTTCTGCAAGAGCAGTGGTGCTATTGCTCGTCACATTCTTCAACAGTTGCAGAACATAAACATCATTGAAATCGACACCAAGGGTGGCAGGAAAATTACTTCAAATGGTCAGAGGGATCTTGACCAAGTGGCTGGTAGAATTGTGGTGGCCCCTTGA 546 0.4817 MQQTFSLMFFAKPSYSSPTPQAAISSLVLSCPPLSVSIMATARTVKDVLPHEFVKAYSAHLKRSGKMELPEWMDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGSFQRIYGGSKRNGSRPPHFCKSSGAIARHILQQLQNINIIEIDTKGGRKITSNGQRDLDQVAGRIVVAP 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1403 181 Gene3D - 30 180 IPR036388 -
Alju02g1403 181 Pfam Ribosomal protein S19e 44 178 IPR001266 GO:0003735|GO:0005840|GO:0006412
Alju02g1403 181 ProSitePatterns Ribosomal protein S19e signature. 128 147 IPR018277 GO:0003735|GO:0005840|GO:0006412
Alju02g1403 181 PANTHER 40S RIBOSOMAL PROTEIN S19 37 177 IPR001266 GO:0003735|GO:0005840|GO:0006412
Alju02g1403 181 SUPERFAMILY "Winged helix" DNA-binding domain 44 179 IPR036390 -
Alju02g1403 181 FunFam 40S ribosomal protein S19 40 181 - -
Alju02g1403 181 SMART Ribosomal_S19e_2 44 180 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1403 Alju-ChrAlju02 11861442 11863757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1403 39 180 Cytoplasmic Ribosomal Protein Gene Family AT5G61170 83.099 1.68e-91 261