Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1379 ATGGAAGACAAATATCATCAACATCATGACCCTCCTCCTTCTCTGGCTCTCCCTAACAATCATCACGATCCCGTCAAAGAAGAATCCCCCAGAAAACCCGTGGCCTCCGCCGGCGGAGATAGGTTGAAGAGAGATGAGTGGAGTGAAGGAGCTGTGTCCACGCTTTTGGAGGCGTACGAAGCCAAATGGGTGCTCCGTAACAGAGCCAAGCTCAAGGGCCATGACTGGGAGGACGTCGCCAGGTGCGTGTCTTCACGCGCCAACTGTACCAAGTCTGCTAAGACCCAGACTCAGTGCAAGAACAAGATCGAGTCCATGAAGAAACGGTACCGTTCTGAATCAGCGTCCGGGGATGCGTCTTCGTCTTGGCCTTTGTATTCTCGTCTTGATCTTCTCCTGCGTGGGACTGGGCCTACTCCGTCCACCACGACGCTCGCCGTGCCACTTGCGGCGGCCCCGGCGGCACCGGCACCGTCTCCGTCTCCGTCTACACTTCACGGGAATAACCAGGGTTTTGTGCTATTGGAGCCTCCGTTGGCGGTGGCTCAGCTTCCTCATCAACCACAGTCGCCTCCGGTGGCCGTCGGGGCTCCTCCTCCGCTTCCCAACGCTCAAAACTCTCATGGATCCAACGGTACTGACAGGTTAGCTAAGGAAGATGGATTAGGAACAAACAAGTCATCAGATCAAGTGTCCAACAAGAACATGAATGAAATTATGGACACAGATAGCAGCACACCAGCACTGTATAGCCATTCAAAGGAGCACCCAACAAGAAGCAACAACAATAACAACAAGAGGAAGATGAAGATGGATAATCGAAGCAACACGAAGAAGATGAAGAGAAAGAGCGGAGAAGGGAAGATTAATGAGATGGGAATAGCAGAGAGCATAAGGTGGCTTGCAGAGGTGGTGGTGAGATCAGAGCAAGCGAGGATGGAGATGATGAAGGAGATCGAGAAGATGAGGGTCGAGGCAGAGGCCAAGAGAGGAGAAATGGATCTCAAAAGAACTGAGATCATTGCTAATACCCAGCTAGAAATTGCTAGGATCTTTGCAAGTGTCAATAATAAAGGTGTTGATTCCTCACTAAGAATTGGTAGGAGTTAA 1110 0.5117 MEDKYHQHHDPPPSLALPNNHHDPVKEESPRKPVASAGGDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARCVSSRANCTKSAKTQTQCKNKIESMKKRYRSESASGDASSSWPLYSRLDLLLRGTGPTPSTTTLAVPLAAAPAAPAPSPSPSTLHGNNQGFVLLEPPLAVAQLPHQPQSPPVAVGAPPPLPNAQNSHGSNGTDRLAKEDGLGTNKSSDQVSNKNMNEIMDTDSSTPALYSHSKEHPTRSNNNNNKRKMKMDNRSNTKKMKRKSGEGKINEMGIAESIRWLAEVVVRSEQARMEMMKEIEKMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNKGVDSSLRIGRS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1379 369 MobiDBLite consensus disorder prediction 21 47 - -
Alju02g1379 369 Coils Coil 312 332 - -
Alju02g1379 369 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 27 355 IPR044823 -
Alju02g1379 369 MobiDBLite consensus disorder prediction 1 47 - -
Alju02g1379 369 FunFam Trihelix transcription factor ASIL2 47 112 - -
Alju02g1379 369 MobiDBLite consensus disorder prediction 184 286 - -
Alju02g1379 369 MobiDBLite consensus disorder prediction 223 258 - -
Alju02g1379 369 Gene3D - 47 112 - -
Alju02g1379 369 Pfam Myb/SANT-like DNA-binding domain 44 131 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1379 Alju-ChrAlju02 11597816 11600396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1379 36 179 Trihelix Transcription Factor Family AT3G14180 33.108 5.13e-18 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju02g1379 Myb_DNA-bind_4 8.6e-19 CL0123