Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1342 ATGGCTGCACAGACACAGTTCCATGTTTTGGTTGTTGATGATAGTCTGATTGAGAGAATTTTGACTGAGAGGCTGCTCAAAACCTCTTCCTATCATGTAACTTCTGTGGAATATGGTAGAAAGGCTTTGAAGTTTCTGGGTTTGCAAGAAGATGATGAAATGAAAGTAGAAACTGCCATTGTTGCTGCAGAAACCCATCAGGATGTGGCGGTAAATTTGATCATCACAGATTATTGTATGCCAGAAATGACAGGCTATGATCTCACCAGAAAAATCAAGGAATCTAAATCTCTTAGAGATATACCTGTGGTGATTATGTCCTCAGAGAATGTGCCATCAAGGATCAACAGATGCTTAGAAGAAGGAGCTGAGGAATTCTTTCTGAAACCAGTTCAGCAATCAGATGTAAGCAGGCTCAAGCCTCATTTGCTGAGATCTAAAGTTAAGGAAGAAGAAGAGCAACTCATTAATAATGAGAGAAAAGACATGGAAGAGAGCCATTCTCAAGATAAATTTAGACCAAATGCATAG 531 0.3936 MAAQTQFHVLVVDDSLIERILTERLLKTSSYHVTSVEYGRKALKFLGLQEDDEMKVETAIVAAETHQDVAVNLIITDYCMPEMTGYDLTRKIKESKSLRDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVSRLKPHLLRSKVKEEEEQLINNERKDMEESHSQDKFRPNA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1342 176 ProSiteProfiles Response regulatory domain profile. 8 144 IPR001789 GO:0000160
Alju02g1342 176 SUPERFAMILY CheY-like 6 156 IPR011006 -
Alju02g1342 176 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 159 IPR045279 GO:0009736
Alju02g1342 176 CDD REC_typeA_ARR 9 139 - -
Alju02g1342 176 Coils Coil 149 169 - -
Alju02g1342 176 MobiDBLite consensus disorder prediction 150 176 - -
Alju02g1342 176 SMART REC_2 7 143 IPR001789 GO:0000160
Alju02g1342 176 Gene3D - 8 174 - -
Alju02g1342 176 Pfam Response regulator receiver domain 9 136 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1342 Alju-ChrAlju02 11128669 11129859 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1342 1 174 Response Regulator Gene Family AT3G57040 48.879 7.97e-67 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju02g1342 Response_reg 1.1e-18 CL0304