Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1332 ATGGCCGAGCAACCCTCGATTTCCTCTTCCTTCTCTTATGGATGGACTTATGATGTCTTTATCAATTTCAGAGGTGAAGATACTCGCTTTGATTTTGCTAGAAACCTCTACGAGGCTTTACAACAAAAAGGTATCCATGTTTTTTTAGACAATGAAAGGATAAGAAAAGGAGAAAAGATTACGCCATCACTTCTCAAAGCAATCCAGGAGTCTAGAATGGCTATTGCTATTTTCTCTAGAAACTATGCTTCCTCTACATTTTGCTTAGATGAGCTTGTTCAGATCCTTGAGCATATAAACAAAAAAGGTAGATTGGTTTTGCCCATTTTTTATGGCGTGGATCCATCGGAAGTACGGCATCAAAGGAAAAATTATAGAGAAGTATTTGCTCAGCATGAGAGGAGGTTTAAAAATGACAAGGAGAAGGTGCGAAAATGGAGGCAGGCTCTGCAAGATGCCGCTAGTCTCTCGGGTCTCCGTTTCGAACCTGGGTATCAATATGAACACGCTTTTATCAAAGCTATTGCAAAAGAGGTCACTAGGAGAATTAACCGCAAACCTTTACACATTGCTGATTATCCAGTTGGGCTTGAGGATCGAGTGCAAAAAGTAAATTCTCTTCTAGATGTTGAATCTAATGAAGGGGTGCAAATGGTAGGAATATGTGGCACTGGTGGAATAGGAAAATCAACAATTGCTCGAGCAGTATGCAGTTCGATTGTGGACTCATTTGAAGGCTTTTGTTTTCTTGCTGATGTTAGAGAAAATTCAGTTGATCATGGCCTAGTATATCTCCAGGAAATACTTCTTTCTGAAGTGTTAGAGGAGGACATTAAGGTAAGAGATGTTAATAAAGGAATTCCAATAATAAAGCATAGGCTCCACAAAAAGAAGGTTCTTCTTGTTCTTGATGATGTTGATAAGCTAAAGCAATTACAAGCAATTGCTGGGGGACTTGATTGGTTTGGTTCTGGTAGTAGAATCATTGTAACAACAAGGGATAAGCATTTACTAGCAAGACATGGTGTTGAAAGAATTTATGAGGTGGACTGTTTAAATAGAGAAAAAGGTCTTGAATTGCTTAAATGGCATGCCTTTAAACAAAGTAGAGTTGATGCAAGTTACATGAGCGTTTTAAACAATGTAGTACTCTATGCCTGTGGTCTTCCGTTGGCTTTGGAAGTTATAGGATCCAACTTGTTCAGTAGAGAAATAAATGATTGGAATTCTGCGTTAGAAAGTTATCAGAGTATTCCAATTAAAGAGATCCAACAAATTCTTAAGGTAAGCTATGATGCTTTGGAGGAATATGAACAGGAGTTTTTTCTTGACATTGCATGTTGCTTCAAAGGTGACAGTTTTGAATATGTAAGAAGTGCTTTGTGTGCACGTGGTATATGCCCAGATTATGGTGTCAAAATGTTGATTGATAAATGTCTCATAAAGATTAATCATGGTAAGGTGACCATGCATGACTTGATTCAAGCCATGGGGAAAGAAATTGTGCGACAGAAATCATCATATGACCCGAGCAATCGCTCTAGGTTATGGTTTCATAAAGACATTCTTCACGTTTTAGAAGAAAACAAGGGTTCTGGGAAGATTGAAGCCATAAACCTAGACATGCCTGGAGATATAGTGATTGATTGGAGTGGAAAGGCCTTCAAAAAGATGCCAAATCTCAAGATACTTATTATCAGAAATGCACGATTTTCTACAGGTCCCAAGTATCTGCCCAACAGTTTAAGAGTGTTGGATTGGAAGGGATATCCTTGTTCATCTTTACCATCTGATTTTAAACCCAAGGAACTAATTATCCTCAAAATGCCAGAAAGTTTCCTCAAACGGGATGTACTACTCAAGCAATGCAGAAAGTTTCAGTCTTTGAGTGTGATGAATTTCAGAGGGTGCTCCAGTCTCACAAGATTCCCAGAAATATTAGGAACCATGGAAAATATCAAAGATGTCCGTTTGGACTTTAGTGGCATAGAAGAATTGCCTTTGTCATTCAAAAACCTTGTCAAATTAGAAAAATTAGAACTTTCATTTTGTAATAGTATTGAAAAAATTGGTGGTATTCCCCCAAACCTAAAAGAATTGTCAGCAATAAACCTTGATTGGTACTCACACCTGAGCTTAGAGTCTCGTGGCATTTTGTTGTGTCAGGCTTTACATGAGGTTGATGGCTTGAAATTCATTGTAGAAGAAGATAAGGCCCCAGAATGGTTTGACCACTATGTTGAGGGAGATTCCTGGTCTTTTTGGTTCCAAAACGAATTCCCAAACATGGCTGTATGTTTTGGTGCATTAATAGAGGACATATGGCACTCACCACCAAAAATGCTTATTGATGTCCGAGTTAATGGCACAGATGTTGGATTGCCGGAAGGGCAAACAATTTTTGCACCACTTTCAACACCACATATCTTTTTGTTTGATTTGCGACGGCTTGTGCTTGAGGATAAACTGAAAAGTGTAGTTTCAGAGAGTGGATGGAACCATGTGGAGATATCATTTGTCTTGAGTTACATAAATTGCTCCCATCCATTGGAATCAGATATAATGTATGGTATGGCAAGGGCCAAATGGAGTGGAGCTTATGTATACAGGCAAAAATCCAGAATGGAAGATATTCAATTCATAAACCCTAGCCAGGAAGCAGTACCTGAGTTATTGAAAGAATCTTCCATGAATCCAGAAGACAGTTTTGCTGAGCTTGTCCTGCGTAGAATGAAGTGGCCCCACATCGATTTCAAACCCATTTCTGAATCTCATTCAGTCACTGGAAGAGAGACTAATACGAGAAAAAGAAAGATGGGTGGGAGAGATCTATCAATATGGGTCCCATCTCCTCCCACTTGTTCTCTTCAGACACCATCGCCCCCCTTGGATGAGAAAGGATGA 2904 0.3908 MAEQPSISSSFSYGWTYDVFINFRGEDTRFDFARNLYEALQQKGIHVFLDNERIRKGEKITPSLLKAIQESRMAIAIFSRNYASSTFCLDELVQILEHINKKGRLVLPIFYGVDPSEVRHQRKNYREVFAQHERRFKNDKEKVRKWRQALQDAASLSGLRFEPGYQYEHAFIKAIAKEVTRRINRKPLHIADYPVGLEDRVQKVNSLLDVESNEGVQMVGICGTGGIGKSTIARAVCSSIVDSFEGFCFLADVRENSVDHGLVYLQEILLSEVLEEDIKVRDVNKGIPIIKHRLHKKKVLLVLDDVDKLKQLQAIAGGLDWFGSGSRIIVTTRDKHLLARHGVERIYEVDCLNREKGLELLKWHAFKQSRVDASYMSVLNNVVLYACGLPLALEVIGSNLFSREINDWNSALESYQSIPIKEIQQILKVSYDALEEYEQEFFLDIACCFKGDSFEYVRSALCARGICPDYGVKMLIDKCLIKINHGKVTMHDLIQAMGKEIVRQKSSYDPSNRSRLWFHKDILHVLEENKGSGKIEAINLDMPGDIVIDWSGKAFKKMPNLKILIIRNARFSTGPKYLPNSLRVLDWKGYPCSSLPSDFKPKELIILKMPESFLKRDVLLKQCRKFQSLSVMNFRGCSSLTRFPEILGTMENIKDVRLDFSGIEELPLSFKNLVKLEKLELSFCNSIEKIGGIPPNLKELSAINLDWYSHLSLESRGILLCQALHEVDGLKFIVEEDKAPEWFDHYVEGDSWSFWFQNEFPNMAVCFGALIEDIWHSPPKMLIDVRVNGTDVGLPEGQTIFAPLSTPHIFLFDLRRLVLEDKLKSVVSESGWNHVEISFVLSYINCSHPLESDIMYGMARAKWSGAYVYRQKSRMEDIQFINPSQEAVPELLKESSMNPEDSFAELVLRRMKWPHIDFKPISESHSVTGRETNTRKRKMGGRDLSIWVPSPPTCSLQTPSPPLDEKG 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1332 967 Gene3D - 13 180 IPR035897 -
Alju02g1332 967 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 185 - -
Alju02g1332 967 Gene3D - 181 345 IPR027417 -
Alju02g1332 967 Pfam TIR domain 17 183 IPR000157 GO:0007165
Alju02g1332 967 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Alju02g1332 967 SUPERFAMILY "Winged helix" DNA-binding domain 421 527 IPR036390 -
Alju02g1332 967 PRINTS Disease resistance protein signature 386 400 - -
Alju02g1332 967 PRINTS Disease resistance protein signature 218 233 - -
Alju02g1332 967 PRINTS Disease resistance protein signature 671 687 - -
Alju02g1332 967 PRINTS Disease resistance protein signature 293 307 - -
Alju02g1332 967 SMART AAA_5 215 352 IPR003593 GO:0016887
Alju02g1332 967 SMART till_3 16 156 IPR000157 GO:0007165
Alju02g1332 967 MobiDBLite consensus disorder prediction 927 967 - -
Alju02g1332 967 SUPERFAMILY L domain-like 534 713 - -
Alju02g1332 967 Gene3D Ribonuclease Inhibitor 547 713 IPR032675 -
Alju02g1332 967 Pfam NB-ARC domain 198 435 IPR002182 GO:0043531
Alju02g1332 967 Gene3D - 351 435 IPR042197 -
Alju02g1332 967 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Alju02g1332 967 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 711 IPR044974 GO:0006952
Alju02g1332 967 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 445 IPR027417 -
Alju02g1332 967 Coils Coil 420 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1332 Alju-ChrAlju02 10972851 10977170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1332 626 705 WRKY Transcription Factor Family AT4G12020 40.000 8.52e-08 54.7