Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1297 ATGAGAATATCCACTCTCTGTTCCATCATCCCCTTCCTCGTTTCCTTCCTCTGGTACAGTTCCACTCTGTCCAGTGCCTACTCTGACCTCGATGCTCTGCTCAAGCTCAAAGCTTCCCTCAAGGGACCTAAAGCTTCAACTTCTGCCATGGAGGATTGGAAACCCTCTGTTTCTCCCTCTGCTCACTGCCAATTCTCTGGAGTTACCTGCGACGATAGTTTCAGGATTGTCTCTTTGAATGTCTCGTTCCATCCCCTGTTTGGCTCTATTCCGCCGGAGATCGGCCTTCTGGACCAGCTTGTCTCTCTCACCCTTTCACAAGACAACCTCACCGGCGAGCTTCCCAAACAGCTCGCCAACCTTACTTCTCTGCAAGTCCTTAATGTTTCTCACAACGCCTTTACCGGAAACTTCCCTGGTGAAATCACTCTCAACATGACGCAGCTTGAGGTTCTAGACGTTTACGATAACAGCTTCAACGGCACGTTACCGGAGGAGGTTGTGATGTTGAAGAATCTGAAGCAACTTTGTTTTGCTGGGAACTACTTATCCGGCGAGATACCAGAGAGTTATTCGGAGTTCGAGAGCTTGGAAATTCTGAAGCTGAATGAGAACAGCCTCAGAGGGAAAATCCCGGCGAGTTTAGCGAAATTGAAGAAGCTCAGGGAATTGCATTTGGGGTATAGTAATGCGTACCAAGGAGGTATCCCGCCGGAGCTTGGCACGATGACCACGCTTCACCGGATCGATTTATCATGCTGTAATCTATCCGGCGAGATTCCACCGAGCTTGGGCAATTTGAAGAACGCGGATACTCTGTTCCTTCAAATGAACAACCTCACCGGAGAAATCCCACCTGAGCTCTCCGGTATGACTAGCCTCATGTCGCTGGATTTATCCATCAACAGCCTCACCGGAGAGATACCCTCCAGTTTTTCAGAGTTAACGAACTTAACTTTGATCAATTTGTATGAAAACAAGCTTCGTGGCCCTATCCCATCATTCATCGGAGACCTTCCGAATTTGGAAGTTCTTCAGGTTTGGGAGAACAATTTCTCGTACATCTTGCCTCAGAATCTGGGCAGTAACGGGAAATTTAAGATCATCGACGTCGCGAGCAACCATTTCACTGGGTTGGTTCCTAAAGATTTGTGTAAAGGAGGCAGGTTGAAGACTTTCATTCTCATGAATAATTCCTTCGACGGTCCAATTCCTGAGCAGCTGGGTGGGTGTAAGTCTTTGGAAAAAGTTCGAATTTCTAATAATTTCCTCAACGGCTCTATCCCTCCTGGGCTTTTCAATCTTCCCTTGGTGACGATGAGCGAACTCAGTGACAACTTGTTATCCGGCGAGTTACCGTCGGATATGTCAGGCGATCTCATCGGAACTTTGACGTTTTCCAATAATTTATTCACCGGGAAAATTCCACCGGCGATCGGGAAGCTCCGGAGCTTGCAGAAACTCTTGCTAGATCTAAATCATTTTGTTGGCGAGATTCCCGAGGAAATGTTCAACTTGCCGATGCTGACGAAGGTGAACATAAGCTTCAACAATCTCAGCGGTCCGATTCCTAATTCAGTTACTCACTGTGCTTCCTTGACTTGTGTTGATCTCAGCATGAACAATCTCGCCGGAGAAATCCCGAGAGCAATCAATAACATAACAGATCTTAGCATCCTCAATCTCTCAATGAACCACCTAACAGGTTCAATCCCCGAGGAGATCCGTTACATGGTGAGCCTGACCACACTCGATCTCTCCAACAACAACCTCGAAGGCAGAATTCCCACTGGCGGCCAATTCAGCGTCTTCTCCGGCGAGACCTTCTCCGGAAACCCCAAACTCTGCTTCCCACAAGACCACTCCTGCAAATCCAACCACAAGCCGCCCCTGAAATCCACCAAAATCATCGTCACAACAATCTCCCTCCTAACCACCCTCCTCCTCGTCGTAATCACAATCTACACACTCCGAAAACGAAAGCAGCACAAATCCCTGACCTGGAAGCTCACCTTGTTCCGACGTCTGAACTTCAAAGCCGACGACATTCTCGAATGCCTAAAGGAAGAGAACATAATCGGAAAAGGCGGCGCAGGGATCGTGTACAGAGGGACCACCAGAGACGGTACAGACGTGGCGATTAAGAGACTAGTGGGCCAGGGTCGGAGCGGTCGGAACGATTACGGGTTCAAGGCAGAGATAGAGACGTTAGGGAGGATCAGGCACAGGAACATAGTGAGGCTGTTAGGGTACGTGTCGAATAAGGACACGAACTTGTTGGTTTATGAGTATATGAGCCATGGGAGCTTAGGGGAATGGCTTCATGGAGTGAAGGGAGGGCACTTACAGTGGGAGGCGAGGTACAAGATCGCGGTGGAGGCGGCGAAGGGACTGTGTTATCTTCACCATGATTGCTCGCCGGGGATCATACATAGGGATGTGAAGTCCAATAATATATTGTTGGATGCATATTTTGAAGCTCATGTTGCTGATTTTGGATTGGCCAAGTTTCTTCTTGATCCTGGTGCTTCTCAGTCCATGTCCTCCATTGCTGGCTCTTATGGCTACATCGCTCCAGAGTACGCATACACACTGAAAGTGGACGAGAAGAGCGACGTGTACAGCTTCGGAGTGGTGCTGCTGGAGTTGATAGTGGGCAGGAAGCCGGTGGGTGAGTTCGGGGACGGCGTGGACATCGTGGGGTGGGTGAAGAAAACCACGTCGGAGCTGCCTCCTCCGCCGTCGGATGCCACCATGGTGATGGCGGTGGTGGACACCAGGCTGACAGGGTATCCTCTCACCGGCGTCATTCACATGTTCAAGATAGCGATGATGTGTGTGGAAGAGAAAGGCAGCTGCAGGCCCACCATGAGAGAAGTCGTTCATATGCTCACCAATATTAATCCTCCTCCTCATCACTCTCCTCCAGATCTCATTCACCTCTAA 2946 0.4946 MRISTLCSIIPFLVSFLWYSSTLSSAYSDLDALLKLKASLKGPKASTSAMEDWKPSVSPSAHCQFSGVTCDDSFRIVSLNVSFHPLFGSIPPEIGLLDQLVSLTLSQDNLTGELPKQLANLTSLQVLNVSHNAFTGNFPGEITLNMTQLEVLDVYDNSFNGTLPEEVVMLKNLKQLCFAGNYLSGEIPESYSEFESLEILKLNENSLRGKIPASLAKLKKLRELHLGYSNAYQGGIPPELGTMTTLHRIDLSCCNLSGEIPPSLGNLKNADTLFLQMNNLTGEIPPELSGMTSLMSLDLSINSLTGEIPSSFSELTNLTLINLYENKLRGPIPSFIGDLPNLEVLQVWENNFSYILPQNLGSNGKFKIIDVASNHFTGLVPKDLCKGGRLKTFILMNNSFDGPIPEQLGGCKSLEKVRISNNFLNGSIPPGLFNLPLVTMSELSDNLLSGELPSDMSGDLIGTLTFSNNLFTGKIPPAIGKLRSLQKLLLDLNHFVGEIPEEMFNLPMLTKVNISFNNLSGPIPNSVTHCASLTCVDLSMNNLAGEIPRAINNITDLSILNLSMNHLTGSIPEEIRYMVSLTTLDLSNNNLEGRIPTGGQFSVFSGETFSGNPKLCFPQDHSCKSNHKPPLKSTKIIVTTISLLTTLLLVVITIYTLRKRKQHKSLTWKLTLFRRLNFKADDILECLKEENIIGKGGAGIVYRGTTRDGTDVAIKRLVGQGRSGRNDYGFKAEIETLGRIRHRNIVRLLGYVSNKDTNLLVYEYMSHGSLGEWLHGVKGGHLQWEARYKIAVEAAKGLCYLHHDCSPGIIHRDVKSNNILLDAYFEAHVADFGLAKFLLDPGASQSMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIVGRKPVGEFGDGVDIVGWVKKTTSELPPPPSDATMVMAVVDTRLTGYPLTGVIHMFKIAMMCVEEKGSCRPTMREVVHMLTNINPPPHHSPPDLIHL 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1297 981 Gene3D Ribonuclease Inhibitor 230 363 IPR032675 -
Alju02g1297 981 Gene3D Ribonuclease Inhibitor 145 229 IPR032675 -
Alju02g1297 981 ProSiteProfiles Protein kinase domain profile. 687 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1297 981 Pfam Protein tyrosine and serine/threonine kinase 688 964 IPR001245 GO:0004672|GO:0006468
Alju02g1297 981 Gene3D Transferase(Phosphotransferase) domain 1 765 973 - -
Alju02g1297 981 SUPERFAMILY RNI-like 348 603 - -
Alju02g1297 981 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 235 335 - -
Alju02g1297 981 SMART serkin_6 687 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1297 981 Pfam Leucine Rich Repeat 246 267 IPR001611 GO:0005515
Alju02g1297 981 Pfam Leucine Rich Repeat 580 596 IPR001611 GO:0005515
Alju02g1297 981 FunFam LRR receptor-like serine/threonine-protein kinase EFR 336 628 - -
Alju02g1297 981 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 765 977 - -
Alju02g1297 981 FunFam Leucine-rich repeat receptor-like kinase 28 145 - -
Alju02g1297 981 SUPERFAMILY Protein kinase-like (PK-like) 680 965 IPR011009 -
Alju02g1297 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
Alju02g1297 981 FunFam Leucine-rich repeat receptor protein kinase EMS1 146 234 - -
Alju02g1297 981 SUPERFAMILY RNI-like 78 401 - -
Alju02g1297 981 Pfam Leucine rich repeat 293 351 IPR001611 GO:0005515
Alju02g1297 981 Gene3D Ribonuclease Inhibitor 365 627 IPR032675 -
Alju02g1297 981 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 656 764 - -
Alju02g1297 981 Gene3D Phosphorylase Kinase; domain 1 652 764 - -
Alju02g1297 981 Pfam Leucine rich repeat N-terminal domain 28 71 IPR013210 -
Alju02g1297 981 SMART LRR_typ_2 291 315 IPR003591 -
Alju02g1297 981 SMART LRR_typ_2 121 145 IPR003591 -
Alju02g1297 981 SMART LRR_typ_2 578 611 IPR003591 -
Alju02g1297 981 SMART LRR_typ_2 482 506 IPR003591 -
Alju02g1297 981 SMART LRR_typ_2 339 363 IPR003591 -
Alju02g1297 981 SMART LRR_typ_2 146 170 IPR003591 -
Alju02g1297 981 Gene3D Ribonuclease Inhibitor 28 144 IPR032675 -
Alju02g1297 981 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 236 966 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1297 Alju-ChrAlju02 10752051 10755909 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1297 26 970 Receptor kinase-like Gene Family AT1G75820 63.417 0.0 1227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Alju02g1297 PK_Tyr_Ser-Thr 2.4e-42 CL0016