Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1289 ATGGATCCAGGTTCCAGTTCTGGCTCCGGCTCAAGCTCAAGCTTAGGCTCGCCATACCAATGGCTCGTAGAAATGGGATGGGAAGCGAAGGGCATTTTAATTGCCCGTCTACTTCCCCACTGTGCAAAACTTACCGAAACCGGCGACGTCATGAACGTGGTAGCCACCCTCCAGAAAATCGCCACTCTGGCAGCCCCAGACGGCGACGCCCTTCAGCGCGTGGCCACTTACGCCAACGAAGGCCTCGCTCATCGGATGCTCAACAAGTACATCCCCGGCCTGTCGGAATCACTGCGTCTATCGAACCGCTCGTCGGCGTCGGAGGTAGTGCTTGTCCGACGGCTGTTCCGAGAGCTGTGTCCCTTCCTGATGTTCTCATACTGGATCTCAAATTACGCCATAGCTGAAGCCATGAGAGGCGAATCGGTGATTCATGTGATCGATTTCAACGCTTCAGATCCAGAACAGGGGATCCATCTTCTTCATACATTGAAGGATCTGTATCAAGCGGATAATTTGCCTCTTCCGTTTTTGAAAATAACGGGGATTCATGAGAAGAAGGAGGTTCTGGACAAGACAGGGTTTCAATTGATGGGAGAGGCTGAGAGATTGAGCTTCCCTTTCTTCTTTTATCCGTTTGAGTGCAAATTGGAGAATATCATGTTTGATAAGTTGCCTCTGAAGCCAGATGAACCTCTTGCCATTGTTTCTGTTCTTCAGCTCCATTCTCTTCTCGCTTCTGATGATCAAACCGTTACGAGTGGGATTAATTGTCCTGCAGAGTTGTTTGAGAGACTAAAGATCAGACCTAGTCCTAACTCAACCCTTTCTCCATGTCCTTCCCCTAAGATGGAGTGTTTTCTAAATGCAATCTGGAACCTCAAACCCAGGTTGATGCTCATCACTGAGCAAGAATCAAACGCCAACGAGTCCTCCCTCAAGACAAGGCTTGAGAATGCACTAGTCTTCTATGGTGCACTCTTTGATTGCTTGGAGGCCAATGTTCCTAAAGCAAGAGAAGCAGATAGATCAATCATGGAGAGGATGCTTTTGGGTGAAGAAATCAAGAACATTATTTCATGTGAGGGAATTCAAAGAAAAGAGAGGCATGAGAAAGCTGAGACTTGGGTTAGATGGCTTGAACTAGCTGGGTTTCAGAGAAAACCTTTGAACTATGCAAGGATATTGCAAGTAACAAGGCCATTGCAAAACTATGGAAAGGGTTATAAGCTTGAGGAGCATAATCAATGTTTGTTTGTCTGTTGGAATGATCGTCCACTTTATTCCATATCGGCATGGAAGTTCTAG 1308 0.4687 MDPGSSSGSGSSSSLGSPYQWLVEMGWEAKGILIARLLPHCAKLTETGDVMNVVATLQKIATLAAPDGDALQRVATYANEGLAHRMLNKYIPGLSESLRLSNRSSASEVVLVRRLFRELCPFLMFSYWISNYAIAEAMRGESVIHVIDFNASDPEQGIHLLHTLKDLYQADNLPLPFLKITGIHEKKEVLDKTGFQLMGEAERLSFPFFFYPFECKLENIMFDKLPLKPDEPLAIVSVLQLHSLLASDDQTVTSGINCPAELFERLKIRPSPNSTLSPCPSPKMECFLNAIWNLKPRLMLITEQESNANESSLKTRLENALVFYGALFDCLEANVPKAREADRSIMERMLLGEEIKNIISCEGIQRKERHEKAETWVRWLELAGFQRKPLNYARILQVTRPLQNYGKGYKLEEHNQCLFVCWNDRPLYSISAWKF 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1289 435 ProSiteProfiles GRAS family profile. 25 434 IPR005202 -
Alju02g1289 435 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 36 429 IPR005202 -
Alju02g1289 435 Pfam GRAS domain family 36 434 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1289 Alju-ChrAlju02 10699127 10701927 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1289 17 434 GRAS Transcription Factor Family AT1G50420 42.094 6.71e-113 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju02g1289 GRAS 3e-96 CL0063