Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1287 ATGGTGGTGGAGCATTTCCTAATTCATTTCCGGTCTCTCTCTCTCTCTCCTTGTACAGATTCGGTAAGACAAAAGCTCAGTAACATGAAAGTGGAAGACAGGGACATGTGCATAGTTCATCTACTGAAGACTTGTGCTAGGTATACAGAATATGGTGAGTTCATGAGGGCAGGTACTGTACTCGAGTGCGTTGCTAGTGTTGCTGCCGCCGATGGTGAGCCCATGCAGAGGATAGCTTCTTATCTTGTTGCAGGCCTTGCTCACAGGTTGGTCAAGAATATTCGTGGTGTGCCTGAAATTCTGAACTTGTCAAGTCCCTTATCAACTTTTTCACAGCAACATGCCAGAAAGTTGTTCCTTGACTTCTGTCCATTCTTGAAGTTCTCTTATATGATCACCAGCCAAGCTATTGTTGAAGCCATGGAAGGGGAACAGGTGATTCATATTATGGATCTCAATGCCTGTGATGCTGCTCAATGGATATATCTTCTTCATGCTCTGAAAGAAACAAGGCAAGGAAGTCAAGTCCCTTGTGTGAAGATCACTGGGATCCATGAGAATAATTGGGTTTTGGAACAAATGACGATTCAATTGATTCAAGAAGCTCAGAAATTGGACATCCCCTTCTACTTCTATCCCATTCAGAGCCCATTGGAGGAATTTTGCTTTGAGAAATTGCCATTGAAGCCTGGAGAGCCCCTTGCCATAAGTTCAGTTCTTCAGCTTCATTCTCTTCTGGCAGTTGATGATCAAATCAGTCCAGATTCAGTCTTGCCACGTAATCCTTCGCAGTTGTTCGATTCGCCTAAGATGAGGTGCTTTCTAAGTAGCCTTTGGAAACTCAAACCGAGGTTGATGGTCATAACAGAACAAGAATCAGATAACAATACTCCTTCATTGCCAGACAGGCTTGATAAGGCACTGAACTTCTATGGTTCACTGTTTGATTGCTTGGAAGCTAATGTTTCGAAAGAAAGAGCGATAGAGAGAATAATGGTGGAGAGGATGCTTCTTGGGGAGGAGATAAAGAACATTATTTCTTGTGATGGAGCTGATAGAAAAGAGAGGCATGGCAAGTTCTTGAAGACTTGGAGGCCATTGCTTGAATTGGCTGGATTTAAGGGGGAGCCTATGAATTATGAGAGAATGTTGGAGGTAACAAGGCCATTGCAGATCTATGGGCTTGAATACAAGTTAAAAGAGAACAATCAATGCCTGTTTACATGTTGGAATGATCTTCCTCTCTATTCTATATCAGCCTGGAGGTTCTGA 1272 0.4292 MVVEHFLIHFRSLSLSPCTDSVRQKLSNMKVEDRDMCIVHLLKTCARYTEYGEFMRAGTVLECVASVAAADGEPMQRIASYLVAGLAHRLVKNIRGVPEILNLSSPLSTFSQQHARKLFLDFCPFLKFSYMITSQAIVEAMEGEQVIHIMDLNACDAAQWIYLLHALKETRQGSQVPCVKITGIHENNWVLEQMTIQLIQEAQKLDIPFYFYPIQSPLEEFCFEKLPLKPGEPLAISSVLQLHSLLAVDDQISPDSVLPRNPSQLFDSPKMRCFLSSLWKLKPRLMVITEQESDNNTPSLPDRLDKALNFYGSLFDCLEANVSKERAIERIMVERMLLGEEIKNIISCDGADRKERHGKFLKTWRPLLELAGFKGEPMNYERMLEVTRPLQIYGLEYKLKENNQCLFTCWNDLPLYSISAWRF 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1287 423 ProSiteProfiles GRAS family profile. 29 422 IPR005202 -
Alju02g1287 423 Pfam GRAS domain family 39 422 IPR005202 -
Alju02g1287 423 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 34 417 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1287 Alju-ChrAlju02 10668682 10671282 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1287 26 422 GRAS Transcription Factor Family AT1G50420 41.176 1.16e-109 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju02g1287 GRAS 2.6e-95 CL0063