Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1286 ATGGAATTAGCAGATTTATCAAGGCACTACCTCAGAGACCTACAAGGACATGACAGGGGCCTATTTCAGATTCGTCTCCTTTACACCTGTGCTAAGCTTATTGAAAATGGCGAGTTCAACAAAGCAAGCCTTGCACTCAAGGACATTGCTTATGTTTCTTCACCAGATGGAGATCCAATGCAGAGGCTCGCTACTTACTTTCAAATGGCGCTTAGAAACAGGCTCATCAAGCAAAGTCGCCATTTTCCTGGAGTCTTTTCTTGTTTGACTTATCCCTGGTCAACCTCAGAACGTGAACATTCCAGAAACTTGTCCTTTCACTTCATCCCTTTCTTCAAGTTCGCTTACCTCATCACCAACCAGGCTATTCTCGATGCCATGGAAAGAGAATCAGTGTTTCATATAATTGATCTCAATCCCAGCAATGCTGTTCAATGGATATATTTTCTTCGTGCTTTGAAAGAACAACGCCAAGGAAACCCACTGCCTCGTGTGAAGATCACCATGATTCATGAGAATAAAGCTATTCTTCAACGCGTGAGGTCTGAATTGGATCGGGAAGCTGAAAAATTGAACATGGTTGTCCAGTTCCATGGCATTGTGAACCAGCTAGAGAATGTTTGCTTTAAGAATTTGCCTTTGATGATGACGCCAGGAGAGCCACTTGCTATAAGTTGTGCTCTTATTCTTCATTCTCTTCTCGCACTAGTTGATGATCAAATCAATAATAATAATCCTGATGATTCAGATAAGATGAGGGAGTTTCTACATCAGCTTTGGAAACTCCATCCCAGGCTGATGGTCATTACAGAACAAGAATCAGATAACAACGGGCCTAGTTTGATCGATAGGCTTGAAAAGGCACTGAACTTCTATGGCGCACTGTTTGATTGCTTGGAGGCTAATGCTCCAAAAGAGAGAGAAATAGAGAGAATCATGGTGGAGAGGATGATTCTTGGAGAGGAGATAAAGAACATTATTGCTTGTGATGGAGTTGATAGGAAAGAGAGGCATGGCAAGTTTTTGAAAACATGGAATCCATTGCTTCAATTGGCTGGATTTAAGGGGGTTCCTATCAATTATAAGAGGATGTTGGAGGTAACTAGATCATTCATGCAGCAATGTGGAAATGGATACAAGTTATTAGACGACGATCAATGTCTGTTTACATGCTGGGAAGACCTTCCACTCTATTCCATATCAGCCTGGAGCTACGAGGGGTGGAGATTTACAAGCTAG 1239 0.4205 MELADLSRHYLRDLQGHDRGLFQIRLLYTCAKLIENGEFNKASLALKDIAYVSSPDGDPMQRLATYFQMALRNRLIKQSRHFPGVFSCLTYPWSTSEREHSRNLSFHFIPFFKFAYLITNQAILDAMERESVFHIIDLNPSNAVQWIYFLRALKEQRQGNPLPRVKITMIHENKAILQRVRSELDREAEKLNMVVQFHGIVNQLENVCFKNLPLMMTPGEPLAISCALILHSLLALVDDQINNNNPDDSDKMREFLHQLWKLHPRLMVITEQESDNNGPSLIDRLEKALNFYGALFDCLEANAPKEREIERIMVERMILGEEIKNIIACDGVDRKERHGKFLKTWNPLLQLAGFKGVPINYKRMLEVTRSFMQQCGNGYKLLDDDQCLFTCWEDLPLYSISAWSYEGWRFTS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1286 412 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 25 399 IPR005202 -
Alju02g1286 412 Pfam GRAS domain family 24 403 IPR005202 -
Alju02g1286 412 ProSiteProfiles GRAS family profile. 14 404 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1286 Alju-ChrAlju02 10657412 10659862 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1286 9 403 GRAS Transcription Factor Family AT1G50420 39.198 1.34e-104 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju02g1286 GRAS 1.9e-96 CL0063