Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1259 ATGGAGCGGTACCTCAGAGATAACTTCGATGTCTCACACAAGCGGCCCTCTGAGGCCGCCCTCCTCCGCTGGAGATCCGCCGTTGCCATCGTCAAGAATCCTCGTCGCCGATTTCGTATGGTCGCTGACCTCGCCAAGCGTGCCGAGGCTGAGAAGAAGCGCAAGAATCTCCAGGAGAAAGTACGAGTTGCTCTCTATGTGCAAAAAGCAGCATTGCAGTTTATTGACGCTGGGCAGCTTGGTTCGTCCATACTCTCCAAAGAGATCAACGAGTCAGGTTTTGCTATTGAGCCCGACGATTTAGCATCCATAAGCAGAACGCATAATAGCAAGAGCTTAGAACTTAACGGAGGAGTAGCAGGATTTGCAAAAGCAGTTAATGTATCATTAAAAGACGGTGTTCATTCAAGTGATGTTGCTCATAGACAAAATATCTTCGGTTCTAACCGCTTCGCTGAGAAGCCCTCAAGAGGATTCTGGATGTTCGTTTGGGATGCAATGCAAGACTTGACTCTCATTATCCTTTTGTTATGTGCTCTTGTTTCAATAGGAGTTGGAATCCCAACTGAAGGTTGGCCAAAAGGTGTATATGATGGAGTGGGAATTGCGCTCTCTATTCTATTAGTTATCTTTGTCACTTCAGTTAGTGACTATAAACAGTCTTTGCAATTCAAAGATTTGGAAAACGAGAAGAAAAATGTCACCATTCAAGTCACTAGAGATGGGAACAGACAAAAAATCTCAGTCTATGAGTTAGTGGTGGGAGATGTTGTTCATTTATCAATTGGAGACATAGTTCCTGCAGATGGACTATTCATATTAGGTTATAGCTTATTAATTGACGAATCAAGCTTATCTGGGGAGAGTGAGGCTGTGCACGTCGACCAAAATACTCCTTTTCTTCTAGCTGGGACCAAGGTACAAGATGGATCTGCTAAGATGCTAGTGACTTCTGTTGGTATGAGGACTGAATGGGGAAGATTGATGGATACTCTGAACGAAGGGGGAGATGATGAGACGCCGTTGCAGGTCAAATTAAATGGAGTTGCGACCATAATTGGAAAGATTGGGTTGGGTTTTGCATTGCTCACATTCTTGGTTCTAACTGGCAGGTTTCTGGTGCATAAAATAGTTCATCATGAAATCACCCAATGGTCCTTACACGACGCATCCGAGCTTCTCAATTTCTTTGCTACTGCTGTGATTATAATAGTTGTGGCAGTTCCAGAAGGGCTTCCTTTGGCAGTGACTCTAAGCCTTGCCTTTGCAATGAAGAAATTAATGAACGACAAGGCACTTGTCAGGCACCTCTCTGCATGCGAGACGATGGGCTCAGCTGGTACTATTTGCACAGACAAAACAGGAACTTTGACTACAAACCACATGGTTGTACATAAAGTATGGATTTGCGGACAAACTAAGGAGATTAAAAGCAATAACAGTGAGTTGAAGTCGTCAATTTCTGAGCAAATATTTGACCTCTTTTTGCAGTCTATATTTCAGAATACTAGCTCAGAGGTGGTCAAAGGTGAAAATGGAAAGAATAAGGTTATAGGTACTCCAACAGAGAAGGCATTGCTAGAATTTGGGTTGCTTGCTGGAGGTGAACGTAGTGTTTATAATGATAAGATATTAACAATCGAACCATTCAATTCAAATAGAAAAAGAATGTCAGTGCTTGTGGCTCTTCCTGGTGCTGCCAATAGGTCTAGAGCGTTCTGTAAGGGAGCATCAGAAATAGTTCTGGAAATATGCGACAAACTTGTGGATACAAACGGCAAAGTTGTTCGTATCTTTGAAGAACAAAGAAAGAACATAGAAAAAGTTATCAATGATTTTGCCTCTGAATCTTTAAGAACTCTATCTATTGCCTTTAAAGATGTTGAAAATTCTAAAGGAGATAAGATTCCTGAGGAGAATTTTACATTGTTGGCTATTGTTGGGATCAAGGATCCTGTGAGGCCTGGAGTAAGAGAAGCTGTAGAAACTTGTAAAGCAGCTGGTATATCAGTAAAGATGGTGACTGGTGATAACATCATTACTGCTAAAGCGATAGCTAGAGAATGCGGTATATTGACAGATGGGATTGCCATCGAAGGACCCGAATTTCGTAAGAAGACACATCAAGAAATGGAGGAGATAATACCAAAAATACAGGTTATGGCTCGATCTTTACCTTTGGACAAGCACACTTTAGTGACACGTTTAAGAAAGGACTTCGACGAAGTTGTCGCAGTAACTGGTGATGGCACCAACGATGCTCCAGCACTGCGTGAGGCGGATATTGGCCTTGCTATGGGCATAGCAGGAACAGAGGTTGCAAAAGAAAATGCAGATGTCATTGTAATGGATGATAACTTCACAACCATACTGAACGTAACCAGATGGGGCCGTTCTGTCTACGTCAATGTTCAGAAGTTTGTTCAATTCCAATTAACAGTAAATGTTGTGGCTCTCATCCTGAATTTTGTTTCCGCTTGTGTGTCAGGTTCTGCTCCTCTTACCGCTGTTCAAATGCTTTGGGTAAACATGATCATGGACACTCTTGGTGCTTTAGCTCTGGCTACAGAACCTCCCCATGATGGGCTGATGAAAAGACCACCCATTGGAAGGAATGTCAGACTCATAACCGGCGTCATGTGGAGGAATATAATTGGCCAGAGCCTCTATCAGCTAGCTGTCCTTTTGGTTCTCAAATTTCGTGGCAAACAGATTTTGAAGCTTAATAGTCCTGATGCAACTTCAGTTCTGAATACTTTTATATTCAACATCTTTGTATTTTGCCAGGTATTCAACGAGATAAACAGCCGTGACATGGAGAAGATCAATGTTTTCCGAGGCATGTTCAGTAGTTGGATCTTCCTTGGAGTTTTGGGCTCAACAATATGTTTCCAAGCCATACTTGTTGAATTTCTTGGTACTTTTGCTCAAACAGTGCCACTAAGCTGGGACCTATGGCTAGCCAGTATCTTAATTGGTGCCGTGAGCTTACCCTTAGCTGCTATTATCAAATGCATTCCCGTTCCATCAGTCGATGGTTTCGCTGACCTTCACCGTCGTCATCATCATCATGATTACATACCCCTCCTGAGTGGCCCAGAGATGGCATGA 3111 0.4272 MERYLRDNFDVSHKRPSEAALLRWRSAVAIVKNPRRRFRMVADLAKRAEAEKKRKNLQEKVRVALYVQKAALQFIDAGQLGSSILSKEINESGFAIEPDDLASISRTHNSKSLELNGGVAGFAKAVNVSLKDGVHSSDVAHRQNIFGSNRFAEKPSRGFWMFVWDAMQDLTLIILLLCALVSIGVGIPTEGWPKGVYDGVGIALSILLVIFVTSVSDYKQSLQFKDLENEKKNVTIQVTRDGNRQKISVYELVVGDVVHLSIGDIVPADGLFILGYSLLIDESSLSGESEAVHVDQNTPFLLAGTKVQDGSAKMLVTSVGMRTEWGRLMDTLNEGGDDETPLQVKLNGVATIIGKIGLGFALLTFLVLTGRFLVHKIVHHEITQWSLHDASELLNFFATAVIIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSAGTICTDKTGTLTTNHMVVHKVWICGQTKEIKSNNSELKSSISEQIFDLFLQSIFQNTSSEVVKGENGKNKVIGTPTEKALLEFGLLAGGERSVYNDKILTIEPFNSNRKRMSVLVALPGAANRSRAFCKGASEIVLEICDKLVDTNGKVVRIFEEQRKNIEKVINDFASESLRTLSIAFKDVENSKGDKIPEENFTLLAIVGIKDPVRPGVREAVETCKAAGISVKMVTGDNIITAKAIARECGILTDGIAIEGPEFRKKTHQEMEEIIPKIQVMARSLPLDKHTLVTRLRKDFDEVVAVTGDGTNDAPALREADIGLAMGIAGTEVAKENADVIVMDDNFTTILNVTRWGRSVYVNVQKFVQFQLTVNVVALILNFVSACVSGSAPLTAVQMLWVNMIMDTLGALALATEPPHDGLMKRPPIGRNVRLITGVMWRNIIGQSLYQLAVLLVLKFRGKQILKLNSPDATSVLNTFIFNIFVFCQVFNEINSRDMEKINVFRGMFSSWIFLGVLGSTICFQAILVEFLGTFAQTVPLSWDLWLASILIGAVSLPLAAIIKCIPVPSVDGFADLHRRHHHHDYIPLLSGPEMA 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1259 1036 Pfam Cation transporting ATPase, C-terminus 832 1005 IPR006068 -
Alju02g1259 1036 Gene3D - 133 333 - -
Alju02g1259 1036 NCBIfam HAD-IC family P-type ATPase 202 509 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju02g1259 1036 NCBIfam HAD-IC family P-type ATPase 712 835 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju02g1259 1036 NCBIfam HAD-IC family P-type ATPase 542 693 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju02g1259 1036 Pfam haloacid dehalogenase-like hydrolase 448 761 - -
Alju02g1259 1036 SUPERFAMILY Calcium ATPase, transduction domain A 234 331 IPR008250 -
Alju02g1259 1036 FunFam Calcium-transporting ATPase 646 792 - -
Alju02g1259 1036 Pfam E1-E2 ATPase 235 428 - -
Alju02g1259 1036 Coils Coil 40 60 - -
Alju02g1259 1036 Gene3D - 16 77 - -
Alju02g1259 1036 SFLD Haloacid Dehalogenase 432 799 - -
Alju02g1259 1036 FunFam Calcium-transporting ATPase 764 1010 - -
Alju02g1259 1036 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1008 IPR023298 -
Alju02g1259 1036 Gene3D - 460 652 IPR023299 GO:0000166
Alju02g1259 1036 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Alju02g1259 1036 PRINTS H+-transporting ATPase (proton pump) signature 606 624 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju02g1259 1036 PRINTS H+-transporting ATPase (proton pump) signature 779 804 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju02g1259 1036 PRINTS H+-transporting ATPase (proton pump) signature 747 763 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Alju02g1259 1036 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Alju02g1259 1036 Gene3D - 165 1006 - -
Alju02g1259 1036 Gene3D - 447 792 IPR023214 -
Alju02g1259 1036 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Alju02g1259 1036 PRINTS P-type cation-transporting ATPase superfamily signature 747 766 - -
Alju02g1259 1036 PRINTS P-type cation-transporting ATPase superfamily signature 771 783 - -
Alju02g1259 1036 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Alju02g1259 1036 PRINTS P-type cation-transporting ATPase superfamily signature 645 656 - -
Alju02g1259 1036 PRINTS P-type cation-transporting ATPase superfamily signature 667 677 - -
Alju02g1259 1036 NCBIfam calcium-translocating P-type ATPase, PMCA-type 107 1008 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Alju02g1259 1036 PANTHER CATION TRANSPORTING ATPASE 73 1008 - -
Alju02g1259 1036 FunFam Calcium-transporting ATPase 16 76 - -
Alju02g1259 1036 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 657 IPR023299 GO:0000166
Alju02g1259 1036 SUPERFAMILY HAD-like 448 852 IPR036412 -
Alju02g1259 1036 SMART Cation_ATPase_N_a_2 120 187 IPR004014 -
Alju02g1259 1036 CDD P-type_ATPase_Ca_PMCA-like 139 880 - -
Alju02g1259 1036 Pfam Cation transporter/ATPase, N-terminus 118 182 IPR004014 -
Alju02g1259 1036 FunFam Calcium-transporting ATPase 460 652 - -
Alju02g1259 1036 SFLD p-type atpase 432 799 IPR044492 -
Alju02g1259 1036 FunFam Calcium-transporting ATPase 212 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1259 Alju-ChrAlju02 10359096 10364878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1259 57 1033 Primary Pumps ATPases AT3G57330 67.143 0.0 1341