Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1252 ATGGGTTACTTCTCTTGCAGAGCTGAATCTGCCGTTTCTACCTCCCATTCTGTATCCCCATCTTCCTCCTCCAACCCCTCCTCTGCCCAGAAACCTGACAAACCCATCAAGATCCAACACTTCGACTACAATGACCTCGAAGCCGCCACTAATGGCTTCTCCGACAGAAAGCTCCTAGGCAAAGGCAGCCATGGCTATGTCTACAAAGCCGTTCTTCGAGGCCGTCCCGTCGCCGTCAAGAGGCCATCGAGAGCTCATGGTGCTGTTCTTCGACGACCCAGTTCGTTGTCTTCTTCGTCGGCGCCGGAGATTACCAACGAGGTGGACAACGAGATCGACATCTTGTCGAAAATTCAGAGCCCGAGATTGGTCAATTTGGTGGGTTTCACAAACGATTCGAAAGATAGACTTCTGGTTGTGGAGTTCATGAGCAATGGAACCCTCTACGATGTTCTTCATTCTTCTCCACGACCACCCAATTGGGGTCGGAGAATCCGATTGGCTCTGCAAACTGCAAAGGCCATCGATACCCTTCATTCCTCAACTCCACCTGTAATTCACCGAGACATCAAATCTGCGAATGTTTTAATAGATCGAAACTTCAATGCTCGATTGGGAGATTTTGGGTTAGCCCTGCGAGGCCATGAAGATGATTATAGACTCAGGTCTACTCCTCCAGCAGGTACTATGGGGTATCTTGATCCTTGTTATGTGACTCCAGATAACTTGAGTACAAAAACAGATGTGTTTAGTTTTGGGATTTTGCTGTTAGAGATGATTAGTGGTAGAAAAGCCATTGATATTACATATTCACCACCTTCCATTGTGGATTGGGCGATTCCTCTCATTAAGAAAGGAAAGTTATTGGCTGTTTATGATCCTAGGATATCACCTCCTAAGGATCCAGTTGTTAGGAAGCAACTGGCTGTGATTGCTGCAAAATGTGTGAGGTCTTGCAGGGAAAGAAGGCCTTCAATGAAGGAGATAGTTGCTTGGCTTACTGGGTTGTGTAAACTGGTGCCTCTTCATTCTTGGAATGGTTTTAACAATCCCTGTATGATGATTGAGGCTGTGGGACGCCCAATTGAAGCTAGAAATGCCCATATGAGTCCAAGACAAGAGGAAGGTTTAGAAGGTGGAAATTTTGAAGCTTTAGATGCTAGATTGTCTAAATCTGCAAATAGATATTCAAGGAGAGTGTATTCTGATCTGGGGTTCAGAAGCAACTTGATGGAACTTATGACTAACCCTGAGGAACCAGATAAATCTGGTTATAGAGTTTCCAGCTCAAGGTTTGGTAGTGGGAGATATTTCACAAGAAGCTTAAATCTCTACAGGGCATGTGGTACAGATAAAGATGCTTTTGGTTTCAGTGAAGGCCAAATTGTTGGTGATGGGAGCTCAAATTTGTGTCCAAAACAAGAAGGTAATTCTGGATCAGATTTGAATTCTCAGGAAGCTGAAGCTAATTCCTAG 1476 0.4485 MGYFSCRAESAVSTSHSVSPSSSSNPSSAQKPDKPIKIQHFDYNDLEAATNGFSDRKLLGKGSHGYVYKAVLRGRPVAVKRPSRAHGAVLRRPSSLSSSSAPEITNEVDNEIDILSKIQSPRLVNLVGFTNDSKDRLLVVEFMSNGTLYDVLHSSPRPPNWGRRIRLALQTAKAIDTLHSSTPPVIHRDIKSANVLIDRNFNARLGDFGLALRGHEDDYRLRSTPPAGTMGYLDPCYVTPDNLSTKTDVFSFGILLLEMISGRKAIDITYSPPSIVDWAIPLIKKGKLLAVYDPRISPPKDPVVRKQLAVIAAKCVRSCRERRPSMKEIVAWLTGLCKLVPLHSWNGFNNPCMMIEAVGRPIEARNAHMSPRQEEGLEGGNFEALDARLSKSANRYSRRVYSDLGFRSNLMELMTNPEEPDKSGYRVSSSRFGSGRYFTRSLNLYRACGTDKDAFGFSEGQIVGDGSSNLCPKQEGNSGSDLNSQEAEANS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1252 491 ProSitePatterns Protein kinases ATP-binding region signature. 59 80 IPR017441 GO:0005524
Alju02g1252 491 MobiDBLite consensus disorder prediction 8 32 - -
Alju02g1252 491 PANTHER OS01G0253100 PROTEIN 21 336 - -
Alju02g1252 491 SUPERFAMILY Protein kinase-like (PK-like) 30 333 IPR011009 -
Alju02g1252 491 FunFam Serine/threonine-protein kinase-like protein 143 346 - -
Alju02g1252 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Alju02g1252 491 Gene3D Transferase(Phosphotransferase) domain 1 143 341 - -
Alju02g1252 491 FunFam Serine/threonine-protein kinase-like protein At1g28390 22 142 - -
Alju02g1252 491 SMART serkin_6 53 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1252 491 MobiDBLite consensus disorder prediction 1 34 - -
Alju02g1252 491 MobiDBLite consensus disorder prediction 466 491 - -
Alju02g1252 491 Pfam Protein kinase domain 54 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1252 491 MobiDBLite consensus disorder prediction 83 102 - -
Alju02g1252 491 Gene3D Phosphorylase Kinase; domain 1 24 142 - -
Alju02g1252 491 ProSiteProfiles Protein kinase domain profile. 53 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1252 Alju-ChrAlju02 10296574 10298049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1252 41 333 Receptor kinase-like Gene Family AT3G59420 43.813 8.77e-74 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Alju02g1252 Pkinase 3.9e-37 CL0016