Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1244 ATGGCAATGGGCAGAGAAATATGGTGGGCCCTTTTCCTTCTCTCATTCCTTGTCTTTGTGGATGAAATCCATGGAAGCGGAAGGAAAGAACAAGCCCTGAGGAATCTGAACAAGGCCAAGTTCTGGGGAGCTTCCTTTGACAGAAGCAGTGGAACCATCTTGGAGGTTGATAATAAGGCCGTGTTTGTCGATCATGATTACGATAAGTCTCGTTACTATTACGCTCAACAAGGTTTAAAAGAGAAAGATAGGATTGAGAGACTTCCAGGGCAGCCTGAAGGTGTGAGTTTATCTCAGTATGGAGGATATGTCACTGTAGATAAAGTTGCAGGACGAGCTTTCTATTATTACTTTGTTGAATCTCAACAATCTCGTGATAGCCACAAATTGCCACTTCTTCTATGGCTCAATGGAGGTCCAGGTTGTTCATCTCTAGCATATGGAGCAATGGAAGAAATTGGGCCCTTCCGAGTTAACAGTGACGGCAAAACACTACACACCAACAAATACTCTTGGACCTATGCCGCAAACGTATTGTTCTTAGAATCACCAGCTGGAGTGGGATTTTCATACTCAAACAAGACATCAGATTATAACAGTAATGGGGACAGAAAAACTGCTTCGGACAATTATGTGTTTTTGAGAAACTGGTTGGAGAGATTTCCTGAGTACAAGACTTCAGATTTCTACATTGCTGGTGAGAGCTATGCTGGTCACTATGTTCCTCAGCTTGCTCACACCATTCTCCACCACAACAACCACCCTAACTCCACCTTCTTCATCAACCTCAAAGGCATCTTGATAGGGAACGCAGTGATAAATGATGAGACAGACACTAGAGGAATTTGGGACTACTTGGCAAGCCATGCCATAATATCAGACAAAGCAGCGCATGATACCAACAAATATTGCAACTTCTCAGATGTTGCCACTATTAGGAGCAAAAAGTGCCGAGCAGCAATTGAAGAAATAGGCAACAATATTGCCTTCATCGATATATACAACATCTATGCTCCTCTATGCCATAATTCCAACCTCACTTCCCTCCCTAAACCCTACTCTGAAGTCATAGATCCATGCAGTGACCATTATGTGTATGCATACATGAACCGAGCAGAGGTACAAGAGGCATTACATGCCAATGTCACTAAACTCACATATGACTGGCAACTTTGTAGAGCTAGCATCAACTGGACTGATGCCCCTTCCACTATACTTCCCCTTTTACAAGAGTTCCTCAACCATGGCCTTCGTCTTTGGATTTACAGTGGTGACGTGGATGCAAGAGTGCCAGTAACAGCAACCAAGTATTCCATTGAGAAGTTGAATCTCACTGTTAAGACTGCTTGGCATCCTTGGTTCGTAAACGGGGAGGTAGGAGGGTACTCAGAGATTTACAAAGAAGGATTAATGTTTGCAACAGTGAGAGGAGCAGGGCATGAAGTGCCAAACTATCAACCAGCAAGAGCCCTTACTTTGGTCAATCACTTCTTAAAAGGCATCCCACTTCCTAATACCACCGCCACAACATTTTGA 1536 0.4355 MAMGREIWWALFLLSFLVFVDEIHGSGRKEQALRNLNKAKFWGASFDRSSGTILEVDNKAVFVDHDYDKSRYYYAQQGLKEKDRIERLPGQPEGVSLSQYGGYVTVDKVAGRAFYYYFVESQQSRDSHKLPLLLWLNGGPGCSSLAYGAMEEIGPFRVNSDGKTLHTNKYSWTYAANVLFLESPAGVGFSYSNKTSDYNSNGDRKTASDNYVFLRNWLERFPEYKTSDFYIAGESYAGHYVPQLAHTILHHNNHPNSTFFINLKGILIGNAVINDETDTRGIWDYLASHAIISDKAAHDTNKYCNFSDVATIRSKKCRAAIEEIGNNIAFIDIYNIYAPLCHNSNLTSLPKPYSEVIDPCSDHYVYAYMNRAEVQEALHANVTKLTYDWQLCRASINWTDAPSTILPLLQEFLNHGLRLWIYSGDVDARVPVTATKYSIEKLNLTVKTAWHPWFVNGEVGGYSEIYKEGLMFATVRGAGHEVPNYQPARALTLVNHFLKGIPLPNTTATTF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1244 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 217 242 IPR001563 GO:0004185|GO:0006508
Alju02g1244 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 470 483 IPR001563 GO:0004185|GO:0006508
Alju02g1244 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 191 IPR001563 GO:0004185|GO:0006508
Alju02g1244 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 180 IPR001563 GO:0004185|GO:0006508
Alju02g1244 511 FunFam Carboxypeptidase 405 500 - -
Alju02g1244 511 FunFam Carboxypeptidase 358 503 - -
Alju02g1244 511 ProSitePatterns Serine carboxypeptidases, serine active site. 231 238 IPR018202 GO:0004185
Alju02g1244 511 Gene3D - 405 500 - -
Alju02g1244 511 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 84 487 IPR001563 GO:0004185|GO:0006508
Alju02g1244 511 SUPERFAMILY alpha/beta-Hydrolases 81 504 IPR029058 -
Alju02g1244 511 Pfam Serine carboxypeptidase 89 500 IPR001563 GO:0004185|GO:0006508
Alju02g1244 511 FunFam Carboxypeptidase 79 343 - -
Alju02g1244 511 Gene3D - 360 396 - -
Alju02g1244 511 Gene3D alpha/beta hydrolase 79 343 IPR029058 -
Alju02g1244 511 ProSitePatterns Serine carboxypeptidases, histidine active site. 470 487 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1244 Alju-ChrAlju02 10191462 10195753 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1244 368 503 Calmodulin-binding Proteins AT2G22960 31.618 2.28e-18 81.3