Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1239 ATGGGCAGAGAAACTTCGTGGGCCCTTTTCCTTCTCTCATTCCTTGTCTTTGTGGATGAAATCCATGGAAGCAGAAGGCAAGAACAAGCCCTCAGGAATCTGAACAAGGCCAAGTTCTGGGGAGGTTCCGTTGACAGAAGCAGTGAAACAATCTTGGAGGTTGATAATAAGGCTGTGTTTGGCGACCATGATTATGATACGTCTCGTTACTATTATGCTCAACAAGGATTAAAAGAGAAAGATAGGATTCAGAAACTTCCAGGGCAACCTGAAGGTTTGAGTTTCTCTCAGTATGGAGGATATGTCACTGTAGATAAAATTGCAGGAAGAGCTTTTTATTATTACTTTGTTGAATCTCAACAATCTCATCATACCCACAAATTGCCTCTTCTTCTTTGGCTCAATGGAGGTCCAGGATGTTCATCACTTGCGTATGGGGCAATGCAAGAGCTGGGACCATTCCGAGTAAACAGTGATGGCAAAACACTTCAAACCAACAAATACTCGTGGAATCATGCTGCAAATGTATTGTTTTTAGAATCACCAGCTGGAGTGGGATTTTCATATTCAAACAAAACATCGGATTATGACAATAACGGTGACCGGAAAACTGCTTCAGACAATTATGTGTTTTTGAGGAACTGGTTGGAGAGGTTTGCAGAGTATAAGGATTCGGAATTGTACATAGCAGGGGAGAGCTATGCAGGGCATTATGTTCCTCAGCTTGCTCACACCATTCTCCTCCACAACAACCACCCCAATTCCTCCTTCTACATCAACCTCAAAGGCATCCTGATAGGGAATGCAGTGATAAATGACAATACAGACAGCAAAGGGATGTGGGATTTTCTGGCAAGCCATGCCATAATATCAGACCAAGCAGCTCGTGCTGTGACCAAATTGTGTGATTTCTCAGAGACTGTCTCCAATCAGACCAATGAATGCAAAGCAGCCTCTGCTGAAATTGAGAATGATGTTAACGACATTAATATTTATAACATCTATGCTCCTCAGTGCCAAAATACCAACCTCACTTCCCTCCCTAAGCCTCCCTCTGTAGTGACAGACCCATGTAGTGATTATTATGTATATGGATATTTGAACCGAGCTGATGTACAAGAGGCACTACATGCCAATGTGACAAAACTCACACATGACTGGGAGCCTTGCAGTGATGTTATATCTCAATGGGTTGATAGTGCTTCCACTGTGCTTCCCCTCTTACATGAGTTCCTCAATCACAGCCTTCAAGTTTGGGTCTTTAGTGGAGATGTTGATGGGAGGGTGCCTGTAACTTCAACCAAGTATTCTATTGAGAGGATGAATCTTCCTGTTAAGACTGCTTGGCATCCTTGGTTTGTCAATGGAGAGGTAGGAGGGTACGCAGAGGTTTACAAAGGAGGCTTAACATTTGTAACAGTGAGGGAAGCAGGGCATCAAGTGCCAAGCTATCAGCCAGCAAGAGCCCTCTCTTTGGTTAGCCACTTCCTACGAGGCATCCCTCTTCCTAATTCCACACACACCCCTAATTTCTAG 1536 0.4375 MGRETSWALFLLSFLVFVDEIHGSRRQEQALRNLNKAKFWGGSVDRSSETILEVDNKAVFGDHDYDTSRYYYAQQGLKEKDRIQKLPGQPEGLSFSQYGGYVTVDKIAGRAFYYYFVESQQSHHTHKLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLQTNKYSWNHAANVLFLESPAGVGFSYSNKTSDYDNNGDRKTASDNYVFLRNWLERFAEYKDSELYIAGESYAGHYVPQLAHTILLHNNHPNSSFYINLKGILIGNAVINDNTDSKGMWDFLASHAIISDQAARAVTKLCDFSETVSNQTNECKAASAEIENDVNDINIYNIYAPQCQNTNLTSLPKPPSVVTDPCSDYYVYGYLNRADVQEALHANVTKLTHDWEPCSDVISQWVDSASTVLPLLHEFLNHSLQVWVFSGDVDGRVPVTSTKYSIERMNLPVKTAWHPWFVNGEVGGYAEVYKGGLTFVTVREAGHQVPSYQPARALSLVSHFLRGIPLPNSTHTPNF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1239 511 Gene3D - 404 499 - -
Alju02g1239 511 Gene3D alpha/beta hydrolase 77 341 IPR029058 -
Alju02g1239 511 Pfam Serine carboxypeptidase 87 499 IPR001563 GO:0004185|GO:0006508
Alju02g1239 511 FunFam Carboxypeptidase 77 341 - -
Alju02g1239 511 FunFam Carboxypeptidase 404 499 - -
Alju02g1239 511 SUPERFAMILY alpha/beta-Hydrolases 83 503 IPR029058 -
Alju02g1239 511 Gene3D - 358 394 - -
Alju02g1239 511 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 82 486 IPR001563 GO:0004185|GO:0006508
Alju02g1239 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 189 IPR001563 GO:0004185|GO:0006508
Alju02g1239 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 215 240 IPR001563 GO:0004185|GO:0006508
Alju02g1239 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 469 482 IPR001563 GO:0004185|GO:0006508
Alju02g1239 511 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 178 IPR001563 GO:0004185|GO:0006508
Alju02g1239 511 ProSitePatterns Serine carboxypeptidases, serine active site. 229 236 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1239 Alju-ChrAlju02 10125754 10131908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1239 366 502 Calmodulin-binding Proteins AT2G22960 27.737 2.21e-13 67.0