Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1210 ATGGAGGAGATCGCAAACCTCATTCCTTCTCACTTCGGTGTTCCTCAGTTCTTGGGTAGCTCCATGGCGGCAAAGATCTTGGATTTTGCAAAAAACATGGTTGATAATACTCATAAAGGCGAGAAGATTTTGTTCATGGAAGTGGCTATTGAAATTGTTAGAACTTCTTACTATCGTTCGAATCCCTCTGCTAATGATCAATACCGTCAAGCTGTGCGAGAATCTATGGACAATCAAAGTCTTAGGCTGGTCCCTGCGAGTAAATCATTTATTGAGGGATTGCAAACTGTGAAGCTTGAAGAAGAAGAAGAGTTGAGTAACTGTGTGATTTGTTTGAAAGGTTTCAGGGTTAGATTAGAAGAAACTACTCTTGGGGAAGATACATCCCTCTTAAGATTTCCTCCTCCTCCTCCTTCATTTCAGCTCCACGAGGCAATGGATCCTTCTCATACTGTTGTTCGATATAATTGTCAAGTGTATACACTTTGTTCTCATCCCAATGTTGTTCTTATGGATCCTCCTAATGATGATCAATACTTCTACATCCAAGCTTTTAAATCAGAATGGAACTGGCAATTGTTGGAACCTGGAGTAGTAGGCCTTTCTAGTACAGATTTTGCAACAAAGGATTTCTTCAACGTCTCAAAGAATTCAATAGATCAAATTGCAAACCTTATTCCTTCTCAATTCGGTATTCCTCAGTTCTGGGGCAGCTCCATCGCGACAAAGATCTTGGATTCTGCAAGAACCATAGCTAATGATACTCATAAAGACAAGAAGATTCTGTTCATGGCCGTGGTTATTGAAGTTAATGCAACTTCGTACTATCGTTCAGATCCTACTATTGATGATCAATACCATCAAGCTGTGCAAGAATCTATGGACAATCAAAGTCTTAAGGTGGTGCCTGCGAGTAAATCATTTATTGAGGCATTGAAAACTGTGAAGCTTGAAGAAGAAAAAGAAGAAGAGTCAAGTAACTGTGCGATTTGTTTGGAAGATTTAAGGGTGGGATCAGAAGAAGCTACTCGTATGCCTTGCTCGCATGTGTTTCACAAACCTTGTATTGTTAAATGGCTGCATCAAAACAACATATGTCCTTTGTGTCGTTTTCAAATGCCCACATGA 1128 0.398 MEEIANLIPSHFGVPQFLGSSMAAKILDFAKNMVDNTHKGEKILFMEVAIEIVRTSYYRSNPSANDQYRQAVRESMDNQSLRLVPASKSFIEGLQTVKLEEEEELSNCVICLKGFRVRLEETTLGEDTSLLRFPPPPPSFQLHEAMDPSHTVVRYNCQVYTLCSHPNVVLMDPPNDDQYFYIQAFKSEWNWQLLEPGVVGLSSTDFATKDFFNVSKNSIDQIANLIPSQFGIPQFWGSSIATKILDSARTIANDTHKDKKILFMAVVIEVNATSYYRSDPTIDDQYHQAVQESMDNQSLKVVPASKSFIEALKTVKLEEEKEEESSNCAICLEDLRVGSEEATRMPCSHVFHKPCIVKWLHQNNICPLCRFQMPT 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1210 375 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 267 374 - -
Alju02g1210 375 SMART ring_2 328 369 IPR001841 -
Alju02g1210 375 Pfam Ring finger domain 327 370 IPR001841 -
Alju02g1210 375 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 288 375 IPR013083 -
Alju02g1210 375 ProSiteProfiles Zinc finger RING-type profile. 328 370 IPR001841 -
Alju02g1210 375 SUPERFAMILY RING/U-box 308 373 - -
Alju02g1210 375 FunFam Uncharacterized protein 289 375 - -
Alju02g1210 375 CDD RING-H2_PA-TM-RING 328 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1210 Alju-ChrAlju02 9921685 9924663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1210 238 375 C3H Transcription Factor Family AT3G15740 35.714 3.66e-17 78.2