Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1184 ATGAGACGTAAATCTTCTTTTCTTTCTGGCCTTGTTTGGTTACCGAGAGAAAAAAATCTGAGAAAATTGCAGTCTAGAATGTTAATAGTGAAGTTTGTCGTCTTGCCTGTCAGTTTTCTGAGTTGCTTCTTTTCCTTTGTGCTGTTGTCGTTGAAGTATTGGTTCAAGATGAATGATGGGAGACCAATAGAGTTGCATTACATAAACCCTGGTTTTCCGTATACTACTACAGAAAGCTTCATGGAGTTCTTCGACGGACCGCCAGTGGACTATGATCACGCTGGACCAATTCCTTATCAGGAGTACTGGTCAATGAACATGAACCCTTACAAGTTTGGATTGTCTGGTTCGGATAGTGCATCTTATTATGGTTCTTACGAAGAAGATAATAGTTTCCCAAGATTGGAGGTCGACAGGGGAGAGTGGGAATATCCTTTAACAACGACCACAGAGGAGCCCACCACGACAGACTCTCCATCCAGAAGGGACGAAGTGAATGGCATGCAAACCATCCCTGAAGAATCCAGCCCAAACCGTCATGATTCCAGTACTGCTCCGGTTATATGGCAAGACAATATCGATCCAGATAATATGACTTATGAGGAATTGTTGGACTTGGGTGAGGCAGTTGGAACTCACAGCCGAGGTCTTTCTCAAGAACTTATTGATTTACTCCCAACCTCGAAGTACAAATTTGGAAGCTTATTTAAAAGAAAAAATTTTGGGAAAAGGTGCGTTATTTGTCAGATGACGTATAGAAGAGGTGACCAACAAATGAAATTACCGTGCAGGCATGTTTACCATGGTGAATGCATCACCAAATGGCTTGGCATTAACAAGAAATGCCCAGTTTGCAACGTTGAGGTATTTGGTGATGAATCAACACATTAG 891 0.4198 MRRKSSFLSGLVWLPREKNLRKLQSRMLIVKFVVLPVSFLSCFFSFVLLSLKYWFKMNDGRPIELHYINPGFPYTTTESFMEFFDGPPVDYDHAGPIPYQEYWSMNMNPYKFGLSGSDSASYYGSYEEDNSFPRLEVDRGEWEYPLTTTTEEPTTTDSPSRRDEVNGMQTIPEESSPNRHDSSTAPVIWQDNIDPDNMTYEELLDLGEAVGTHSRGLSQELIDLLPTSKYKFGSLFKRKNFGKRCVICQMTYRRGDQQMKLPCRHVYHGECITKWLGINKKCPVCNVEVFGDESTH 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1184 296 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 207 290 IPR013083 -
Alju02g1184 296 MobiDBLite consensus disorder prediction 146 187 - -
Alju02g1184 296 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 61 292 IPR033276 GO:0004842|GO:0016567|GO:0046621
Alju02g1184 296 SUPERFAMILY RING/U-box 244 290 - -
Alju02g1184 296 MobiDBLite consensus disorder prediction 147 187 - -
Alju02g1184 296 Pfam Ring finger domain 244 286 IPR001841 -
Alju02g1184 296 ProSiteProfiles Zinc finger RING-type profile. 245 286 IPR001841 -
Alju02g1184 296 SMART ring_2 245 285 IPR001841 -
Alju02g1184 296 FunFam E3 ubiquitin ligase BIG BROTHER 207 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1184 Alju-ChrAlju02 9608347 9612311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1184 59 296 C3H Transcription Factor Family AT3G63530 54.286 6.17e-94 276