Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1161 ATGGACGATCAAGCCGCCATAAAGATTGTTAAGTTGTTAGATACGCGTCTCTATGAGGCTCATATTCCATCGCCATTACCCACCTCACGATCTCTTCATATCCCCCCCCCCAACACCCACAATCCGCCATTCCCCTCTCCGGCTCATCCTCTGAAACCCAATCTCCCCTCTGATTCCACCTCCTTGATTCTCTTCGCCTTACAAGTTACTACTATTGTTGTTGTTATGGCTCAGAGAACGGAAAAGGAAGAAACCGATTTTAAGGTCCCTGAAACCATAATCCCCTGCGTTAACAACTGCGGCGTCACCGGGAATCCGGCCAACAATAATATGTGCCAGAAGTGCTTCAACGCCACCACCTCCGCCGTCGCCGCGTCCTTATCGTCGTCGTCTTCTTCCTCTTCCTCTGCTGCCGGAGTTTCGGCGCCTTCTAAATTTGTCGACGACAAGTCTTCTAGATCTACCGCATCTCGGTCTCCTAAGAGATCCTATCCTTCTGATGAGTATACGCAAACGACGGATCGGGCGAAAATGGACGAGGTGGCGCCGTCTGAAGCGAAGCGTGTGGTGAATCGGTGCTCCGGATGCCGGAGGAAGGTTGGGTTGACGGGGTTCCGGTGCCGGTGCGGGGAGTTGTTCTGTTCTGAGCATAGGTACTCCGATCGTCATGATTGCAGCTACGACTACAAAGCCGCCGGACGTGAGGCGATCGCGAGGGAGAATCCGGTGGTCAAAGCCGCGAAGATCGTGAAAGTTTGA 759 0.531 MDDQAAIKIVKLLDTRLYEAHIPSPLPTSRSLHIPPPNTHNPPFPSPAHPLKPNLPSDSTSLILFALQVTTIVVVMAQRTEKEETDFKVPETIIPCVNNCGVTGNPANNNMCQKCFNATTSAVAASLSSSSSSSSSAAGVSAPSKFVDDKSSRSTASRSPKRSYPSDEYTQTTDRAKMDEVAPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKAAGREAIARENPVVKAAKIVKV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1161 252 MobiDBLite consensus disorder prediction 26 53 - -
Alju02g1161 252 SUPERFAMILY AN1-like Zinc finger 176 246 IPR035896 -
Alju02g1161 252 SMART A20_3 93 117 IPR002653 GO:0003677|GO:0008270
Alju02g1161 252 ProSiteProfiles Zinc finger AN1-type profile. 187 233 IPR000058 GO:0008270
Alju02g1161 252 MobiDBLite consensus disorder prediction 157 171 - -
Alju02g1161 252 MobiDBLite consensus disorder prediction 29 52 - -
Alju02g1161 252 PANTHER AN1-TYPE ZINC FINGER PROTEIN 94 251 - -
Alju02g1161 252 Gene3D - 75 141 - -
Alju02g1161 252 ProSiteProfiles Zinc finger A20-type profile. 90 124 IPR002653 GO:0003677|GO:0008270
Alju02g1161 252 FunFam Zinc finger A20 and AN1 domain-containing stress-associated protein 1 76 172 - -
Alju02g1161 252 MobiDBLite consensus disorder prediction 129 182 - -
Alju02g1161 252 FunFam Zinc finger AN1-type containing 6 166 248 - -
Alju02g1161 252 Pfam AN1-like Zinc finger 193 230 IPR000058 GO:0008270
Alju02g1161 252 Pfam A20-like zinc finger 94 117 IPR002653 GO:0003677|GO:0008270
Alju02g1161 252 Gene3D - 166 248 IPR035896 -
Alju02g1161 252 SMART AN1_Zf_4 193 230 IPR000058 GO:0008270
Alju02g1161 252 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 96 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1161 Alju-ChrAlju02 9414557 9418746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1161 83 252 C2H2 Transcription Factor Family AT3G52800 36.207 8.48e-29 105