Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1154 ATGAGAGTTTTTGAGCCTCTAGAGCGTCTCTCATTCCCGCAGCGTTGCAAGTTACTGCAGAACCAGAGGGAGGAGGTAGCGGCTGAAGCCGAAGCTGTAGCAATGGCTCCCAAGCAAAGAACACCAAGGGTGAGCAGGAATCCCGAATTGATTAGAGGGATTGGTAAGTACTCGAGGTCCAAGATGTACCACAAGAGGGGACTCTGGGCTATCAAGGCCAAAAATGGTGGCTCTTTCCCTCGTCACGATCCTAAGCCAAAGGCTGAAGCACCTGCGGAGAAAGCTCCCAAGTTTTATCCCGCCGATGATGTCAAGAAGCCCTTGGTCAATAAGCACAAGCCGAAGCCTACTAAGCTCAGGGCTAGCATAACTCCGGGCTCTGTGCTGATTCTTCTTGCTGGGAGATTCAAGGGAAAGAGAGTAGTTTTTCTGAAGCAGCTTCCTTCTGGACTGCTCCTTGTTACTGGTCCATTTAAGATTAATGGAGTTCCTTTGAGACGTGTATGCCAATCCTACGTCATTGGCACCTCCACCAAGGTTGATATTTCTGGAGTCAATGTGGAGAAATTTGACGACAAGTACTTCGCCAAGAAGACTGAAAAGAAGAAGAAGAAGAGTGAAGGAGAGTTTTTTGAGGCCGAAAAGGAGGAGAAGAATGTGATCCCCCAAGAGAAGAAGGATGACCAGAAAACCGTGGATTCTGCTTTGTTAAAAGCCATAGAGAGCGTCCCAGATTTGAAGGCTTATTTGGGTGCAAGGTTCTCCCTCAAGGCTGGCATGAAGCCTCATGAACTAGTCTTCTAA 804 0.4813 MRVFEPLERLSFPQRCKLLQNQREEVAAEAEAVAMAPKQRTPRVSRNPELIRGIGKYSRSKMYHKRGLWAIKAKNGGSFPRHDPKPKAEAPAEKAPKFYPADDVKKPLVNKHKPKPTKLRASITPGSVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVCQSYVIGTSTKVDISGVNVEKFDDKYFAKKTEKKKKKSEGEFFEAEKEEKNVIPQEKKDDQKTVDSALLKAIESVPDLKAYLGARFSLKAGMKPHELVF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1154 267 MobiDBLite consensus disorder prediction 78 95 - -
Alju02g1154 267 Coils Coil 196 216 - -
Alju02g1154 267 PANTHER 60S RIBOSOMAL PROTEIN L6 37 267 IPR000915 GO:0003735|GO:0005840|GO:0006412
Alju02g1154 267 Pfam Ribosomal protein L6, N-terminal domain 37 94 IPR005568 GO:0003735|GO:0005840|GO:0006412
Alju02g1154 267 CDD KOW_RPL6 115 267 IPR041997 -
Alju02g1154 267 Pfam Ribosomal protein L6e 160 267 IPR000915 GO:0003735|GO:0005840|GO:0006412
Alju02g1154 267 MobiDBLite consensus disorder prediction 74 95 - -
Alju02g1154 267 MobiDBLite consensus disorder prediction 206 229 - -
Alju02g1154 267 FunFam 60S ribosomal protein L6 121 206 - -
Alju02g1154 267 Gene3D - 121 205 IPR014722 -
Alju02g1154 267 SUPERFAMILY Translation proteins SH3-like domain 121 207 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1154 Alju-ChrAlju02 9369943 9373162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1154 35 267 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 81.974 5.22e-125 353