Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1123 ATGGAGCTTGATTTGAACGTGGAGCCCTTGGACCAAACCCCTACCTCAGTGATTGGATTTGATTCTATATTGGATGAGCTAGAATCAACGCATGAACATATAGAAGAGCGCATCAGGCAACTTGAAGCAGTAACCTTGAGATCTAGGCAGCGTCAGAGGTGGAGACGGGGTCATGATTCAGTTCAAATAAATAATGTCATCGCAGATATGATGATGACACCAAATGCTCATGATGAGCAAAGGATGCCCCAGGAAGATGTTGGTGTTGCAGTCCAGGAAGGAACGGTTGTGTTAGCGGAATTGACAACAACTACTGCTCAAAATGAAGCTAGCTTGCTTAGGGAAGAGGCTGGTGCAGACCAAGAAAGAACAGTCAACAATAGGAAAACGGGCAAAAGGAACAGTTCCCATTTAGTAGCTAAAGCATTGGGCATGGATCCATATATAGATGAGGCAGTGAGCTCCACCGGGAATTTTTTTGATTGTAACATCTGTCTGGACATGGCAAGGGATCCGATTTTGACATGCTGTGGTCACTTATTCTGTTGGCCATGCTTTTATCAGGTGTCATATGCTTATTCAAATGTAAGGGAATGCCCTGTTTGTAAGGGAGAGGTCACTGAAACAGGCACTATTCCAATTTATGGAAATAAAGATGACTCTAGCAACCGTCAGTTGGAATTGAAAGAAAGTGGTTTTACTATCCCTCCTCGGCCCCAAGCACGTAGAATTGATAGTCTTAGACAACAGCTCATAAGCAGGGGAGCATCATCTTCTACAATCCAGGAGATTAGGCGATTTATTGGTTCAGCTGCTACTGATAGAACTCGATTTTCAGTCAATCAACCTCGCCATACCCAGCCCCAAGCATTACATGGCATGGAGACTGAAGTCAGGCAGAATAATCGTTCACGTCTACTTTCAAGGTTGTTAGTTGAAGGAGCTGCTTCATTTTCATCCCTTTCATCAGCATTAAATTCTGCAATGGATTCTGCTGAAAGATTAGTTGGAGACCTTGAAGCATATATCCATCCTCAACAACCTCAACCCATAGGAAGCTCTAGAGAGCTGCTACATCCTCTTCCTCGTAATAGAGATTCACCTTCTAGCATTGCTGCTACAAACCAATCAGGGAGACATATTCCAGATGTAGCTGCAAGCGATTCTGTAGCCAATGCTTCTGTTTCTCCTTTACATATGAACAATGACACGACTGCTGTAATAGATTCAAGCATCCAGACAGCAGATAACGGTGTACAAATTAGTTCAATAGAGCCTTCTTCATCTTCTAGCAGAACTGTTGCGATAGGACTTCCAGACCTTTACAATAGAGTTCCAAATGGGCGCAGGAGGAGAAGGCTAAGAAGATGA 1371 0.4354 MELDLNVEPLDQTPTSVIGFDSILDELESTHEHIEERIRQLEAVTLRSRQRQRWRRGHDSVQINNVIADMMMTPNAHDEQRMPQEDVGVAVQEGTVVLAELTTTTAQNEASLLREEAGADQERTVNNRKTGKRNSSHLVAKALGMDPYIDEAVSSTGNFFDCNICLDMARDPILTCCGHLFCWPCFYQVSYAYSNVRECPVCKGEVTETGTIPIYGNKDDSSNRQLELKESGFTIPPRPQARRIDSLRQQLISRGASSSTIQEIRRFIGSAATDRTRFSVNQPRHTQPQALHGMETEVRQNNRSRLLSRLLVEGAASFSSLSSALNSAMDSAERLVGDLEAYIHPQQPQPIGSSRELLHPLPRNRDSPSSIAATNQSGRHIPDVAASDSVANASVSPLHMNNDTTAVIDSSIQTADNGVQISSIEPSSSSSRTVAIGLPDLYNRVPNGRRRRRLRR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1123 456 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 262 IPR013083 -
Alju02g1123 456 SMART ring_2 162 202 IPR001841 -
Alju02g1123 456 ProSiteProfiles Zinc finger RING-type profile. 162 203 IPR001841 -
Alju02g1123 456 Pfam zinc-RING finger domain 162 203 IPR001841 -
Alju02g1123 456 MobiDBLite consensus disorder prediction 345 376 - -
Alju02g1123 456 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 120 300 IPR045103 GO:0005783|GO:0006511|GO:0061630
Alju02g1123 456 Coils Coil 24 44 - -
Alju02g1123 456 SUPERFAMILY RING/U-box 154 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1123 Alju-ChrAlju02 9120988 9122358 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1123 116 268 C3H Transcription Factor Family AT3G58030 43.506 1.94e-34 132