Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1117 ATGTCCTCCGCCACGGCCCCCGCCCCCGCTGCCGACACTTCCGTCGTGCCAGAGACGGCGGAAGCAGAAATGAAGACATACTGGTGTCACGAATGCGACATGAGTGTTGCTCTGTCTTCCCCTTCTTCGTCTTCAACTTCCTCATCAACTCTTCTCTGCCCCCATTGCCACACCCACTTTCTCGAGCTCATGGACTCTCCTTTCTTCCCTCAATCAGATTCTCATTCATTTCCCACTTCGCTTTCCCTCTTCGACACCCCCTACCTCCACCACCTAATCCAAAACCACCTCCTTCCCTCGGACGACGACGACAGTGAGCTTGAGTACGACGACGTTTTCGAAGACCCGTTATCTCTGCTCTCCACATTACCAAATATCACCTCCAAATCTTGCTCTGATTCTGTACCCACGATAATAGTTACCTCTTCCTTGCTATCGCAGCTTGACCCTGGAGGCGTTATTTGTGCGGTTTGTAAGGACCCAATTGGGGTTGATGCGCAGGCTAAGCAGCTTCCGTGTAAGCATTTGTACCACTCCGATTGCATTACGCCGTGGCTGGAGCACCACAATTCTTGCCCGCTTTGTCGCTTTCAGCTGGTCGGTGAAAAAGAGGAGGGGGTTTCTCAGGCGAGGAGGATTAGAAGGCAGTTGAGGACAGCCATGACGAGGCTATCTGAATTGATGGAAGAGGAGGATGATTTCTATGGTTTGAGGACCACTCTGAGTCACATTGCTAGTAGACACCGCGTTCTTTCTTCTGCTGTTTCAGGTCAAAGGAATGATGAGAACCCTTCTGATTCCCTGGCTCCCCCTCCGATGACGGAAGCAGATTCTGTATCTGCTGGCGTCAATGGTATAGGGTTTTTATATGCCAAAGAAATCTTGAAGTTGTGTCACCATAGATTGGCTAATCAAGTGTAA 921 0.5049 MSSATAPAPAADTSVVPETAEAEMKTYWCHECDMSVALSSPSSSSTSSSTLLCPHCHTHFLELMDSPFFPQSDSHSFPTSLSLFDTPYLHHLIQNHLLPSDDDDSELEYDDVFEDPLSLLSTLPNITSKSCSDSVPTIIVTSSLLSQLDPGGVICAVCKDPIGVDAQAKQLPCKHLYHSDCITPWLEHHNSCPLCRFQLVGEKEEGVSQARRIRRQLRTAMTRLSELMEEEDDFYGLRTTLSHIASRHRVLSSAVSGQRNDENPSDSLAPPPMTEADSVSAGVNGIGFLYAKEILKLCHHRLANQV 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1117 306 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 82 199 - -
Alju02g1117 306 SUPERFAMILY RING/U-box 147 199 - -
Alju02g1117 306 SMART ring_2 155 195 IPR001841 -
Alju02g1117 306 MobiDBLite consensus disorder prediction 252 267 - -
Alju02g1117 306 Coils Coil 210 230 - -
Alju02g1117 306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 146 211 IPR013083 -
Alju02g1117 306 MobiDBLite consensus disorder prediction 252 276 - -
Alju02g1117 306 Pfam Ring finger domain 155 196 IPR001841 -
Alju02g1117 306 ProSiteProfiles Zinc finger RING-type profile. 155 196 IPR001841 -
Alju02g1117 306 Pfam zinc-ribbon 26 64 IPR039525 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1117 Alju-ChrAlju02 9079279 9081839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1117 20 260 C3H Transcription Factor Family AT3G60080 35.971 1.13e-33 123