Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1105 ATGGCTTTTATCCTTAACCCCAGCTTCTGCCGCCACCTGTTATTAATTTCCCTGTGCTTCCTTTTTTCTGCCATTGATTCACTTTCCAGCGCTGTTTCCATTTCTGTAACTTCCAACCACACATTAATATGTGCCTTGCAGAGTACCAACCGTCTCAACTGTACCAGTTTTCCCGCTGGCATTCAAATTCAAGTGAACCCCAACATTTCCTTCTCTGAGATTGCTGGAGGAAATGGGTTTATCTGTGCATTGAGGCCACCAATGGGTTCACCTTCTTTTTCTTTCATGTTTTGTTGGAGATTCTCTACCAATGCGACCAATGTTGTCCCCAAGAGAATATACCGTGGGCCTATGATTCAAAATTTGGAAGCTGGAAACTCTCAAGTATGTGGCCTTTCAAGCCCCAGAAATGAGCTTAACTGCTGGCAATGGCCTGGGTTCAACACAAGTGAAAGAAGCTTCTCGAGCATATCTGCGGGAGAGAATTTCGTTTGCGGGTTATTGGAAACATATGGGAATATTAATTGCCTTGGAAATAATAGCACAGTTATTGAAGATGAACCTACAGGGAATTACTCTGTGATTGCTGCAGGGACGAGACATGCTTGTGCTATCTCCTCCATTAATGGAAGCTTGTATTGTTGGGGTGACGGACCAGGAGCCACATTGAAGCCTCCTCCAGGGAGATTCGTCTCTTTGGCTTTGGGAGACAATCGAAGTTGTGCTTTGAGCGCTGTGAATCGTACAATTGTTTGTTGGGGGACGGATGGTTTTAACATGCCAGAGAGCTTGAGAAACCAATCTTTTGTAGCAATCACAGCTAAAGGAAGTGTTTTCTGTGGTGTCATGTCTGGTGATTATTCTTTGCATTGTTGGGGAAATGATAATTTGGGGATGAACGGGAATGCTCATAAGGTGTTTGATAAGGTCCTACCTGGTCCTTGTAGAACTCAATGTCCATGTGGAACATTGCCAGGTTCTGCACAGTTTTGTGAACCGGGTCAAGGATCTATTTGCAGTTCTTGTGATAGCCAACTACTACCTGAATCCCAACCACCGCCTCCGCCTCCACCGTCACCGACAAGTGCTCCTTCACAATCAAGGCAAAATGATTGGAACAGTAAAATGGTGGCATTTCTAGTGGTTGGCTGTGTTGGTTCACTTTCTTTGATGCTAGTCCTGGCATTCTTTCTCTACAAGTATTGCAAAGGCCGAGGATGCAAGCGTGTCCATGACTCCGGCCGGTTGGATGAGCCCGAAGATCAACCAGCAAACCAGCGAACTTTAGAGAAGAGATTGAGCCATATGATCAGCATGGGAAATGGAGGCCACTTGGAGGAATTTTCTTGGGAAATACTATTGGAAGCAACCAACAATTTCTCAGAGGATAAAAAAATAGGAACAGGCAGTTTTGGTTCAGTGTACCATGCCACACTCAAAGATGGCAGAGAAGTGGCCATCAAAAGAGCTGAGATCTCGTCGACCTCCCCATCAAACCAAATCCCAGGAGGCTCCAAGCGTCAAGAAGACAAAGACAATGCGTTTGTGAATGAACTCGAATCCTTATCCAGACTCAACCATAAGAACCTGGTGAGATTACTGGGTTTCTTCGAGGACAAGAATGAGAGAATTCTAGTCTACGAGTTTATGAACAATGGTAGCCTAACAGACCACCTTCACAAGTTCCAAACTTCAACTCCTAATTGTCCTTTCATGTCATGGTCAGGACGCATCCAAGTAGCTCTAGACGCAGCCAGAGGCATAGAGTACCTACACGAGTATGCAATTCCGCCGATCATTCATCGTGATATTAAATCAGCAAACATACTATTAGACGCCAAATGGGTCGCCAAAGTATCAGATTTTGGACTCTCCCTAATGTGTCCTGAAGATGAAGAGTCTCATCTCTCTCTTCTGGCTGCAGGCACCGTAGGGTACATGGATCCAGAGTACTACAGGCTGCAACACTTGACCACAAAGAGCGACGTGTACAGTTTTGGTGTTGTTTTGCTTGAACTGCTTTGTGGGTATAAAGCTATACACCGGAACGAGAATGGGATGCCGAGGAATGTGGTGGATTTTGTGGTGCCATACATTGTGCAGGATGAGATTCATAGGGTTTTGGATCGGAGGTTGCCGCCACCCACACCGTATGAGATAGAGGCGGTGGCATTTGTGGGATATTTGGCGGCAGATTGTGTGAGTTCAGAAGGACGTGATCGTCCCACAATAACTAATGTTGTAGATAGGCTGGAAAGAGCGTTGGATGCTAGTTTAGCTCAACCAAAACCAACACTTTCTAGCTTTCACTCTGATTCTGATTCTGATTAA 2331 0.453 MAFILNPSFCRHLLLISLCFLFSAIDSLSSAVSISVTSNHTLICALQSTNRLNCTSFPAGIQIQVNPNISFSEIAGGNGFICALRPPMGSPSFSFMFCWRFSTNATNVVPKRIYRGPMIQNLEAGNSQVCGLSSPRNELNCWQWPGFNTSERSFSSISAGENFVCGLLETYGNINCLGNNSTVIEDEPTGNYSVIAAGTRHACAISSINGSLYCWGDGPGATLKPPPGRFVSLALGDNRSCALSAVNRTIVCWGTDGFNMPESLRNQSFVAITAKGSVFCGVMSGDYSLHCWGNDNLGMNGNAHKVFDKVLPGPCRTQCPCGTLPGSAQFCEPGQGSICSSCDSQLLPESQPPPPPPPSPTSAPSQSRQNDWNSKMVAFLVVGCVGSLSLMLVLAFFLYKYCKGRGCKRVHDSGRLDEPEDQPANQRTLEKRLSHMISMGNGGHLEEFSWEILLEATNNFSEDKKIGTGSFGSVYHATLKDGREVAIKRAEISSTSPSNQIPGGSKRQEDKDNAFVNELESLSRLNHKNLVRLLGFFEDKNERILVYEFMNNGSLTDHLHKFQTSTPNCPFMSWSGRIQVALDAARGIEYLHEYAIPPIIHRDIKSANILLDAKWVAKVSDFGLSLMCPEDEESHLSLLAAGTVGYMDPEYYRLQHLTTKSDVYSFGVVLLELLCGYKAIHRNENGMPRNVVDFVVPYIVQDEIHRVLDRRLPPPTPYEIEAVAFVGYLAADCVSSEGRDRPTITNVVDRLERALDASLAQPKPTLSSFHSDSDSD 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1105 776 MobiDBLite consensus disorder prediction 490 510 - -
Alju02g1105 776 Gene3D - 23 186 IPR009091 -
Alju02g1105 776 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 187 761 IPR044815 GO:0004674
Alju02g1105 776 Pfam Regulator of chromosome condensation (RCC1) repeat 195 217 - -
Alju02g1105 776 ProSitePatterns Protein kinases ATP-binding region signature. 466 488 IPR017441 GO:0005524
Alju02g1105 776 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 550 763 - -
Alju02g1105 776 MobiDBLite consensus disorder prediction 345 369 - -
Alju02g1105 776 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Alju02g1105 776 SUPERFAMILY RCC1/BLIP-II 97 305 IPR009091 -
Alju02g1105 776 ProSiteProfiles Protein kinase domain profile. 460 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1105 776 SMART serkin_6 460 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1105 776 Gene3D Transferase(Phosphotransferase) domain 1 550 766 - -
Alju02g1105 776 Pfam Protein kinase domain 460 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju02g1105 776 Gene3D Phosphorylase Kinase; domain 1 432 549 - -
Alju02g1105 776 SUPERFAMILY Protein kinase-like (PK-like) 437 751 IPR011009 -
Alju02g1105 776 CDD STKc_IRAK 466 753 - -
Alju02g1105 776 Gene3D - 187 318 IPR009091 -
Alju02g1105 776 MobiDBLite consensus disorder prediction 348 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1105 Alju-ChrAlju02 8986498 8988828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1105 30 763 Receptor kinase-like Gene Family AT5G47850 50.599 0.0 690
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Alju02g1105 Pkinase 1.6e-45 CL0016