Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1090 ATGATGCAAGGAAGTGGACAAATAGCAGTGCCTCCAGGGTTCAGGTTTCACCCAACAGATGAGGAGCTTCTTTACTATTATCTGAGGAAGAAAGTCTCTTTTGAAGCCATTGACCTTGATGTCATCCGAGAAGTTGATCTCAACAAACTTGAGCCTTGGGATCTCAAAGAAAAATGTAGGATTGGATCAGGACCTCAGAACGAGTGGTACTTCTTCAGCCACAAGGACAAGAAGTACCCCACCGGAACCCGAACAAACCGGGCGACAATGGCCGGATTCTGGAAAGCAACAGGGAGGGACAAGGCCATATACATGAGCAATTCAAAGAGGATAGGGATGAGGAAAACCCTAGTGTTCTACACAGGCCGTGCTCCTCACGGCCAAAAGACTGACTGGATCATGCATGAGTACCGCCTAGACCAAGATGATGCTGATCAGCTTCAGGAAGATGGGTGGGTGGTGTGTAGGGTATTCAAGAAGAAGAACTTCTACAGAGGATTTCAACAGGAAATGGAAGAAGATGAGCAGATAATGAGCCACCACATGGCATCAACAAGTACTGCTTCTAATAATAATAGCATGAAGGTATTCGAACCATTAAAACATGCACACCACCACCACCTTCATCATCAAGGACTTGTTCTACCTTATGATGATGATGACCACCATAATAATATTAATAATCATAGTAGCTATCACAATAATAATTATAGTAGCTGCTTTAATGCCTCCATGCACCTACCACAGTTACTCAGTCCAGAATCTGCTGCCCCGCCCCTTCCTTCTGCAACCTCTTCGTCGTCTTCCACGTCGACTACTATGAACCCTATGGACGTCCTTCACTGTTCTCAAAGCTTACTTAGGCTGGCTTCAACTTCTTCTCTTCCACCTGGAGGACTCCTTAGTAATCTCATGCAGCAACAATGTGATCATCATCAGAGACTCAATAATAATAATGGAGACTGGTCCTTCTTGGACAAGCTATTAGCTTCACAACAACAACAACATCAACCTGTGGTTCCTCCTCTTGTGGCTTCTTCTTCCCACAAGTTCCCTTTTCATTACCTCGCTTGTGATCATAGTGACATCATGAAGTAA 1098 0.4454 MMQGSGQIAVPPGFRFHPTDEELLYYYLRKKVSFEAIDLDVIREVDLNKLEPWDLKEKCRIGSGPQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAIYMSNSKRIGMRKTLVFYTGRAPHGQKTDWIMHEYRLDQDDADQLQEDGWVVCRVFKKKNFYRGFQQEMEEDEQIMSHHMASTSTASNNNSMKVFEPLKHAHHHHLHHQGLVLPYDDDDHHNNINNHSSYHNNNYSSCFNASMHLPQLLSPESAAPPLPSATSSSSSTSTTMNPMDVLHCSQSLLRLASTSSLPPGGLLSNLMQQQCDHHQRLNNNNGDWSFLDKLLASQQQQHQPVVPPLVASSSHKFPFHYLACDHSDIMK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1090 365 Gene3D NAC domain 19 165 IPR036093 GO:0003677|GO:0006355
Alju02g1090 365 MobiDBLite consensus disorder prediction 258 274 - -
Alju02g1090 365 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 238 - -
Alju02g1090 365 ProSiteProfiles NAC domain profile. 10 160 IPR003441 GO:0003677|GO:0006355
Alju02g1090 365 Pfam No apical meristem (NAM) protein 11 139 IPR003441 GO:0003677|GO:0006355
Alju02g1090 365 SUPERFAMILY NAC domain 5 160 IPR036093 GO:0003677|GO:0006355
Alju02g1090 365 FunFam NAC domain-containing protein 19 164 - -
Alju02g1090 365 MobiDBLite consensus disorder prediction 252 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1090 Alju-ChrAlju02 8856207 8857773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1090 2 331 NAC Transcription Factor Family AT1G79580 57.522 2.46e-115 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g1090 NAM 9.2e-38 No_clan