Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1069 ATGGCACCAATGAGTCTCCCACCTGGGTTCAGGTTTCACCCAACAGATGAAGAACTCGTTGCTTACTACTTGGAAAGAAAAATCACAGGCCGTTCTATAGAGCTTGAAATTATCCCTGAAGTTGATCTTTACAAATGCGAACCCTGGGATTTGCCAGAGAAGTCGTTCTTACCAAGTAAGGATATGGAGTGGTACTTCTACAGTCCAAGAGACAGAAAGTATCCAAATGGGTCAAGAACAAACAGAGCAACAAGAGCTGGATACTGGAAAGCCACAGGGAAAGATAGGGCAGTTCACTCTCAGAAACGACAAGTAGGAATGAAGAAGACGTTGGTTTATTACAGAGGAAGAGCCCCACATGGCATCAGAACCAACTGGGTCATGCACGAGTATCGTCTTACTCATTCAATACCTCCCACTTCCACTTGCTCCTTGAAGGATTCTTATTCATTGTGTCGTGTCTTCAAGAAGACGATCCAAATCCCAAAACCAAAAGAAGATCAGGATCAGGAAGAGGAAACAGAAATGACTGCTAATAAGAATAAGGGATCAAAGTCTGGCATGTGGGTCGCAGAAGAACAAGGACTAAGAGAAGATTCAAGTGGCTTCGAGGTTTCTAAAGAAATGGAAATTGCAGATGAGAAAAGAATGGTCAATAATAATAATAATGATGGTGACAATTCTAATAGTAAATTTCCTTGTGATAATGCTTCATCCTCGGATCTCACTCAAGGGACCCCCATTGACCAAACTGGTATAACAGATAATGATTTTCAAGCCCAAATTGCTTCTGATGAAGCAAATAGTGCAGCCAATCCGTATTCCCTTGGAATTGACTATTCGTCAAGTCTGTTTCAGGAAATGGAGCTACAAATGTATGCTGGAATGCACTATCAACTTCCATATCCAGCACTGGAGCTTGAAGATTTCCCTCAGACAAGTTTTGGAGACACGAAGCCATTAATAAAGGCAGCAGATCAACAAATGGTGATGAATGATTGCTCGGTGTATGATCAGAAATACAAGAGCTGTGGTACAATGAGTGGGACCCTAGAAGAGATCATATCCTTGTGTTCTTCTCATCAAGACAATAACTCTTTGCCTCTCTCTATGTTAGATTGA 1122 0.4162 MAPMSLPPGFRFHPTDEELVAYYLERKITGRSIELEIIPEVDLYKCEPWDLPEKSFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVHSQKRQVGMKKTLVYYRGRAPHGIRTNWVMHEYRLTHSIPPTSTCSLKDSYSLCRVFKKTIQIPKPKEDQDQEEETEMTANKNKGSKSGMWVAEEQGLREDSSGFEVSKEMEIADEKRMVNNNNNDGDNSNSKFPCDNASSSDLTQGTPIDQTGITDNDFQAQIASDEANSAANPYSLGIDYSSSLFQEMELQMYAGMHYQLPYPALELEDFPQTSFGDTKPLIKAADQQMVMNDCSVYDQKYKSCGTMSGTLEEIISLCSSHQDNNSLPLSMLD 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1069 373 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Alju02g1069 373 MobiDBLite consensus disorder prediction 163 187 - -
Alju02g1069 373 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 226 - -
Alju02g1069 373 MobiDBLite consensus disorder prediction 221 252 - -
Alju02g1069 373 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Alju02g1069 373 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Alju02g1069 373 MobiDBLite consensus disorder prediction 163 179 - -
Alju02g1069 373 FunFam Nac domain-containing protein 86 15 160 - -
Alju02g1069 373 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Alju02g1069 373 MobiDBLite consensus disorder prediction 211 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1069 Alju-ChrAlju02 8647278 8651176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1069 1 356 NAC Transcription Factor Family AT1G54330 52.222 1.63e-104 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju02g1069 NAM 5.7e-40 No_clan