Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1060 ATGTTCCCTCCAAAGAAGCCCTCAACTATGAATTCTCATGACAGACCAATGTGTGTTCAAGGCGACTCAGGCCTTGTCCTCACCACCGACCCCAAGCCTCGTCTTCGTTGGACCGTCGAACTCCATGAACGCTTCGTCGATGCCGTCACTCAGCTCGGTGGCCCTGATAAGGCCACGCCTAAAACCATCATGAGGGTTATGGGAGTGAAGGGTCTTACCCTTTACCATCTCAAGAGCCACCTTCAGAAATTTAGGCTTGGGAAACAACCCCACAAGGAATTCAATGATCACTCGATTAAGGATAGCATGAGAGCTTCGGCCTTAGAGCTTCAACGAAACACTGCTTCCCCATCGGCCATGATTGGTCGCAACATGAACGATAACTCACGCATGGTTAATGCGACTAGGATGCAAATGGAGGTGCAGAGGAGACTGCATGAACAGCTTGAGGTCCAGAAACACCTTCAGCTTAGAATTGAAGCTCAAGGAAAGTACATGCAGAGTATATTGGAGAAGGCTTATCAAACACTTGCAGGTGAAAACATGGCTGCTGCCAATAATTTAAAGGGAAATATCAATATTGGAGCAGCTCAAGCTATCCCTGAAATAGGAGGAGTCGTCATGAAAGATTTCAGTTCACCTCTTACTTTTCCTTTTCAAGAACTCAACATCTACGGTGGAGGTGGTAGTGGAGCCGGCGGCAGCGATCAACTTGATCATCATCTTCACCATATGGAGAGGCCACAACTTGAAGGGTTGATGATACCAAATAACAACAACAATAACAATAACAATCATAACAATGGTGACAATTTGTGTTTGGGAAAGAAGAGGCCAAGCCCTTATAATAGTACTACTACTACTGGGAAGAGTCCTTTGATTTGGAACGACGATCTTCGGCTTCATCAAGATTTAGGGACGGCTTCGTCGTGCCTCGGAGGACCTCAAGATGATCCTTTCAAAGGTCTTGACCCGCATCAACTTCACATTGCACCGCCATCGTTGGATCATAGAGTAGGTGAAATGGATGCCATGTCAGAGGTTTATGACACGAAGCCGGTGCTACAAGGAGAAGCTGTGTGTGACAAATTTTCAGACGCTTCGGTGAAGCTTGAAAGGCCATCGCCGAGAAGGACACTGGCGACGACCACCCCTCTTCAGGGAGAAAGGATGAGCCCCATGATTAGTAGTGGTGCTATGGCACAAGGAAGAAGCTCACCATTTGGGTGA 1230 0.4732 MFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDSMRASALELQRNTASPSAMIGRNMNDNSRMVNATRMQMEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMAAANNLKGNINIGAAQAIPEIGGVVMKDFSSPLTFPFQELNIYGGGGSGAGGSDQLDHHLHHMERPQLEGLMIPNNNNNNNNNHNNGDNLCLGKKRPSPYNSTTTTGKSPLIWNDDLRLHQDLGTASSCLGGPQDDPFKGLDPHQLHIAPPSLDHRVGEMDAMSEVYDTKPVLQGEAVCDKFSDASVKLERPSPRRTLATTTPLQGERMSPMISSGAMAQGRSSPFG 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1060 409 Pfam Myb-like DNA-binding domain 35 83 IPR001005 -
Alju02g1060 409 SUPERFAMILY Homeodomain-like 31 87 IPR009057 -
Alju02g1060 409 FunFam Myb family transcription factor 31 89 - -
Alju02g1060 409 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 29 89 IPR017930 -
Alju02g1060 409 MobiDBLite consensus disorder prediction 1 24 - -
Alju02g1060 409 MobiDBLite consensus disorder prediction 257 271 - -
Alju02g1060 409 Pfam MYB-CC type transfactor, LHEQLE motif 134 176 IPR025756 -
Alju02g1060 409 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 10 184 IPR044848 GO:0003700
Alju02g1060 409 MobiDBLite consensus disorder prediction 373 409 - -
Alju02g1060 409 MobiDBLite consensus disorder prediction 377 391 - -
Alju02g1060 409 NCBIfam myb-like DNA-binding domain, SHAQKYF class 32 87 IPR006447 GO:0003677
Alju02g1060 409 MobiDBLite consensus disorder prediction 257 289 - -
Alju02g1060 409 Gene3D - 31 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1060 Alju-ChrAlju02 8514916 8518108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1060 1 409 G2-like Transcription Factor Family AT1G79430 52.123 7.13e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Alju02g1060 Myb_DNA-binding 2.3e-06 CL0123