Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1038 ATGAGGAGTGGCTTTCTTCTCCTCTATCTGAGTCTAGCCATTATTTCCCTCACTCATTGTGATGCAGAGAGATGGATGAGAGTTTCGAAAGATCCAAAACATGGGAGAATTCTGAGACACAAGCACGCCAAGAAGTTGAGAATGGCTTTAGAGAATTTTGATTTTTCTTCCTTGGAATTTTTAAATGCACAGATTGTTGACTCATCATCTCCTTTGCCACCTTATGAATCTCTGGCTCCCATTCCTTTCCCTCAAAATAGCCCCCCGTTTTGTTATCCTCCCCCACCTCCGACGGGCCTGCAATTACCACCTCCAGGCCCATCTGGGTCTCTTCCCACACCCACACCACAAAGCATCCCAATCTCACCTGGTACGGGTTCACCATTACAAAATCCTCCAATTATTTTCCCCAGCCCATTGGGTAACATTCCTACCTCACCTGGGTCCACAACAAGCCCACCAACTGGAGGCACTGGACCGTACTCACCTGAACCAATACAAAATCCTCCAATTATTATCCCGGGCCCACCTGGTAACATTCCGACCTCACCTGGGTCTACAACAAGCCCACCAACTGGAGGCACTGGGCCCGTCTCACCTGAGCCAATACAAAATCCTCCAATTATCCTCCCAGGCCCTCCTGGATCTACGACAAACCCACCAAGTACTATACCATCCCCAAGTGGAGGCACTGAGCCTGGCTCACCTGAACCGATACAAAACCCACCTGGGTCTACAATTCCATCTCCAAATGAAGGTTCTGTTCCAAACTCCCCAGAACCAATACAAAATCCTCCCATTATTCTTCCAGGCCCACCCGGGTCAACCCCAAACCCGTCTCCTAGTGGGGGAGACAGTGTTCCCAGCCCAACAGTGTTTGAGCCGCCTGTAGTGTATCCACCACCTTCAGTGCCTCCCCCTCCTGGGCGCATGGCCCCAAGTGGAGCCTTATGGTGTGTGGCTAAGCCTTCAGTCCCAGACCCAATAATGCAAGAAGCCATGAACTATGCTTGTGGGTTAGGAGCAGATTGTGAGCCCATTCGGCCCAATGGACCTTGCTTTGAGCCCGATACTATTATTGCACACACTTCATTTGTCTTCAATAGTTTCTGGCAAAATTCCAAGGCTACTGGTGGGAACTGCGACTTTGGAGGCACTGGCATGCTTGTTTCAGAGGACCCAAGCTACGATGGATGCCACTTCGTCTACAGTTAA 1215 0.5021 MRSGFLLLYLSLAIISLTHCDAERWMRVSKDPKHGRILRHKHAKKLRMALENFDFSSLEFLNAQIVDSSSPLPPYESLAPIPFPQNSPPFCYPPPPPTGLQLPPPGPSGSLPTPTPQSIPISPGTGSPLQNPPIIFPSPLGNIPTSPGSTTSPPTGGTGPYSPEPIQNPPIIIPGPPGNIPTSPGSTTSPPTGGTGPVSPEPIQNPPIILPGPPGSTTNPPSTIPSPSGGTEPGSPEPIQNPPGSTIPSPNEGSVPNSPEPIQNPPIILPGPPGSTPNPSPSGGDSVPSPTVFEPPVVYPPPSVPPPPGRMAPSGALWCVAKPSVPDPIMQEAMNYACGLGADCEPIRPNGPCFEPDTIIAHTSFVFNSFWQNSKATGGNCDFGGTGMLVSEDPSYDGCHFVYS 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1038 404 Gene3D - 312 402 - -
Alju02g1038 404 PRINTS Proline rich extensin signature 66 82 - -
Alju02g1038 404 PRINTS Proline rich extensin signature 165 190 - -
Alju02g1038 404 PRINTS Proline rich extensin signature 143 160 - -
Alju02g1038 404 PRINTS Proline rich extensin signature 126 142 - -
Alju02g1038 404 PRINTS Proline rich extensin signature 105 126 - -
Alju02g1038 404 PRINTS Proline rich extensin signature 86 98 - -
Alju02g1038 404 MobiDBLite consensus disorder prediction 158 184 - -
Alju02g1038 404 FunFam Glucan endo-1,3-beta-glucosidase 4 312 404 - -
Alju02g1038 404 MobiDBLite consensus disorder prediction 142 157 - -
Alju02g1038 404 MobiDBLite consensus disorder prediction 86 140 - -
Alju02g1038 404 PANTHER BETA-1,3 GLUCANASE 313 401 IPR044788 -
Alju02g1038 404 Pfam X8 domain 317 388 IPR012946 -
Alju02g1038 404 MobiDBLite consensus disorder prediction 86 294 - -
Alju02g1038 404 SMART X8_cls 317 401 IPR012946 -
Alju02g1038 404 MobiDBLite consensus disorder prediction 259 279 - -
Alju02g1038 404 MobiDBLite consensus disorder prediction 195 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g1038 Alju-ChrAlju02 8004289 8005863 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1038 318 402 Glycoside Hydrolase AT5G56590 46.512 1.23e-23 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju02g1038 02 8004289 8005863 Alju02g1038 02 8004289 8005863 ECH